Pseudomonas fulva: Psefu_3690
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Entry
Psefu_3690 CDS
T01501
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pfv
Pseudomonas fulva
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfv03019
]
Psefu_3690
03009 Ribosome biogenesis [BR:
pfv03009
]
Psefu_3690
Messenger RNA biogenesis [BR:
pfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Psefu_3690
Ribosome biogenesis [BR:
pfv03009
]
Prokaryotic type
rRNA processing factors
Psefu_3690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AEF23651
UniProt:
F6AF07
LinkDB
All DBs
Position
complement(3961019..3962476)
Genome browser
AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFVDI
GLERAAFIHASEISSREGSAVESISALVHEGQSLTVQVTKDPIGSKGARLTTQLSIPSRY
LVYMPRTSHVGISLKIEDETERERLKQVVADCVAAEGIAEAGGFILRTAADGARADEILV
DIRYLRRLWTQIGEQMKSAPTPSVIYEDLSLALRTLRDLVSPRSEKIRVDSRETFGKITS
FVAELMPEIADRLEHYPGERPIFDLHGIEDEIQKALERKVPLKSGGYLIIDPAEAMTTID
VNTGAFVGHRTLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHQRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCSHCQGRGKLKTAETTCYEI
FREILREARAYQPEGYRVLANQKVVDRLLDEESGNVADLEAFIGRTIKFQVETMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagatcctgatcaacatcacgccgatggagtcgcgcgtggcggtggtggaa
aacggtgtcctgcaggaggtgcacgtcgagcgcacccagcgccgcggcatcgtcggcaac
atctacaagggcaaggtggtgcgcgtgctgcccggcatgcaggcggccttcgtcgacatc
ggcctggagcgtgcggcgttcatccatgcctcggaaatctccagccgcgaaggcagcgcc
gttgagagcatcagcgccctggtgcacgaaggtcagagtctcaccgtgcaggtcacaaag
gacccgattggcagcaagggcgcgcgactgaccacccagctgtcgattccctcgcgttac
ctggtgtacatgccgcgtaccagccatgtcggtatttccctgaagatcgaagacgaaacc
gagcgcgagcgcctcaaacaggtggtcgccgattgcgtggctgccgagggcatcgccgag
gccggtggtttcatcctgcgcaccgcggccgatggcgcgcgggccgacgaaatcctggtc
gacatccgctacctacgccgcctgtggacgcagatcggcgagcagatgaagagtgcaccg
acgccctcggtgatctacgaggatctgagcctggccctgcgcaccctgcgcgatctggtc
agtccgcgttccgagaagatccgcgtcgactcgcgggaaaccttcggcaagatcaccagc
ttcgtcgccgaactgatgccggaaatcgccgaccgcctggagcactatccgggcgagcgg
ccgatcttcgacctgcatggcattgaggacgaaatccagaaggcccttgagcgcaaggtg
ccgctcaagtccggtggttacctgattatcgacccagccgaggcgatgaccaccatcgac
gtgaatactggcgcctttgtcggtcatcgcacgctcgaggagaccatcttcaagaccaac
ctcgaagcggccaccgcgattgcccgtcagctgcgcctgcgcaacctgggcggcatcatc
atcatcgacttcatcgacatggaagatgaggagcaccaacgtcaggtgctgcgcaccctg
gaaaagcagctggagcgcgaccacgccaagaccaacatcatcggcatcaccgaacttgga
ctggtgcagatgacccgcaagcgcacccgcgaaagtctcgaacaggtgctgtgcgagccg
tgcagccactgccagggccgcggcaagctgaaaaccgcggaaaccacctgctacgaaatc
tttcgcgagatccttcgtgaggcccgggcctaccagcccgaaggttatcgcgtgctggcc
aaccagaaggtggtcgaccgcctgctcgacgaagagtcgggcaacgtcgccgacctcgaa
gcattcattggacgaaccatcaagttccaggtcgaaaccatgtactcccaggaacaatac
gatgtggtgctgctgtaa
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