Pseudomonas fulva: Psefu_3725
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Entry
Psefu_3725 CDS
T01501
Name
(GenBank) Sigma 54 interacting domain protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
pfv
Pseudomonas fulva
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfv03000
]
Psefu_3725
Transcription factors [BR:
pfv03000
]
Prokaryotic type
Other transcription factors
Others
Psefu_3725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
NACHT
BrxC_BrxD
AAA_30
MCM
AAA_19
ATPase_2
AAA_7
AAA_33
AAA_2
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AEF23686
UniProt:
F6AFQ3
LinkDB
All DBs
Position
complement(4007388..4008992)
Genome browser
AA seq
534 aa
AA seq
DB search
MARKRTVAIGFIGATLDRVGKGANRWNKWRPSIGLCQQADLLIDRLELIHGVDARDISLA
ERIRADIEQISPETEVRLQPMHLRNPWDFEEVYGALHDFTSGYAFDTEREDYLVHITTGT
HVAQICWFLLTEARYLPARLVQTSPARKRDEQAQVTGTHALIDLDLSRYDRIATRFQHER
LEGLAFLKSGIATRNAAFNRSIEQIERVAVRSSAPMLLIGPTGAGKSFLARRVYELKRSR
HLVDGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNARDGLLRAADGGMLFLDEIGELG
LDEQAMLLKAVEEKRFFPMGADKEVSSDFLLIAGTHRDLRARVAEGLFREDLYARVNLWT
FDLPGLAGRREDIEPNIDFELERHAREQGRMVRFNLEARRRYLAFASSGEAAWQGNFREL
SASITRMATLADSGRIDEGQVQEEIERLRRAWGASAAEDDLSTLLGEAAGDIDLFDRLQL
QAVIDICRQAGSLSEAGRRLFDISRQAKAQPNDADRLRKYLARFGVSWQSIREK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaacgtaccgtcgccatcggcttcatcggcgccaccctggatcgggtcggc
aagggcgccaatcgctggaacaaatggcggccgagcatcgggctgtgtcagcaggcggat
ttgctgatcgatcgcctggagctgattcacggcgtcgatgcgcgcgacatcagcctggcc
gagcgcattcgcgccgacatcgagcagatctccccggaaaccgaggtgcgcctgcaaccg
atgcatctgcgcaacccctgggatttcgaagaggtgtatggcgcgctgcatgacttcacc
agcggctatgccttcgataccgagcgtgaggactacctggtacacatcaccaccgggacc
cacgtggcgcagatctgctggttcctgctcaccgaggcgcgctacctgccggcgcggttg
gtgcagacctcgccggcgcgcaagcgtgatgagcaggcgcaggtcaccggtacccatgcg
ctgatcgacctcgacctgtcgcggtacgaccgtatcgctacacgcttccagcatgagcga
ttggaggggctggcgtttctcaagtcgggcatcgccacgcgcaacgcggcattcaaccgc
tccatcgagcagatcgagcgggtcgccgtacgctcctcggcaccgatgctgctgatcggc
ccgaccggagcgggcaagtcgttcctggcccggcgcgtctacgaactcaagcgcagccgt
catctggtcgatggccgcttcgtcgaggtcaattgcgcgaccctgcgcggcgacggcgcc
atgtcggcgttgttcggtcatatcaagggcgccttcaccggtgcgcaaaatgcccgcgat
ggcctgctgcgcgccgccgatggcggcatgctgtttctcgacgagatcggcgaactgggc
ctggacgagcaggccatgctgctcaaggccgtcgaggaaaagcgcttctttcccatgggc
gcggacaaggaggtgagcagcgattttctgctcatcgccggcacccatcgcgacttgcgc
gcacgggtcgccgaagggctgtttcgtgaagacctctatgcgcgcgtcaatctgtggacc
ttcgatctaccgggcctggccgggcgccgcgaagacatcgagccgaacatcgatttcgag
ctcgagcgccatgcgcgcgaacaagggcgaatggtgcgcttcaacctggaagcgcggcgc
cgctacctggccttcgccagctccggcgaagccgcctggcagggcaacttccgcgagctg
tcggcctcgatcacgcgcatggcgaccctggccgacagcgggcgcatcgacgagggtcag
gtacaggaagagatcgagcggctgcggcgcgcctggggcgcttcggcggcggaggatgac
ctttcgactctgttgggcgaggccgcaggtgatatcgatctgttcgaccgtctgcaactg
caggcagtgatcgatatctgtcggcaggcgggtagtctgtccgaggccggcaggcgtttg
ttcgacatcagtcgccaggccaaggcccagcccaacgacgcggatcgcctgcgcaagtac
ctggcgcgcttcggcgtgagctggcagtccattcgggagaagtga
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