Pseudomonas fulva: Psefu_4229
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Entry
Psefu_4229 CDS
T01501
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfv
Pseudomonas fulva
Pathway
pfv00260
Glycine, serine and threonine metabolism
pfv00460
Cyanoamino acid metabolism
pfv00630
Glyoxylate and dicarboxylate metabolism
pfv00670
One carbon pool by folate
pfv00680
Methane metabolism
pfv01100
Metabolic pathways
pfv01110
Biosynthesis of secondary metabolites
pfv01120
Microbial metabolism in diverse environments
pfv01200
Carbon metabolism
pfv01230
Biosynthesis of amino acids
pfv01240
Biosynthesis of cofactors
pfv04981
Folate transport and metabolism
Module
pfv_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Psefu_4229
09102 Energy metabolism
00680 Methane metabolism
Psefu_4229
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Psefu_4229
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Psefu_4229
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Psefu_4229
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Psefu_4229
Enzymes [BR:
pfv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Psefu_4229
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AEF24181
UniProt:
F6A8M6
LinkDB
All DBs
Position
complement(4615856..4617109)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLSAMQAEERRQEHHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEVLAIERAKQLFGADYANVQPHSGSSANSAVYLALLQPGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTDTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGAYLFVDMAHVAGLVAAGLYPNPVPLADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKDYQAQVIKNAQAMAQ
VFIDRGFDVVSGGTDNHLFLLSLIKQGITGKDADAALGRAGITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKEAQCRELAGWIADILEHLGDADVEAQVAGLAAGLCADYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagatcagattcaaggctacgatgacgccctgctcagtgccatgcag
gccgaggagcgtcgtcaggaacatcacatcgagctgattgcctcggaaaactacaccagc
aagcgcgtgatggaagcccagggcagcggcctgaccaacaagtacgccgaaggctatcca
ggcaagcgctactacggcggttgcgagcatgtggataaagtcgaggtgctggccatcgag
cgcgccaagcagctgttcggtgccgattacgccaacgtgcagccgcactccggctcttcc
gccaactcggctgtctacctggcactgctgcagcccggcgacaccattctgggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcgataccgataccgggctgatcgactacgacgaagtcgag
cgcctggccgtcgagcacaagccgaagatgatcgtcgccggcttctcggcctactccaaa
actttggatttcccgcgtttccgtgccatcgccgacaaggtcggggcttacctgttcgtc
gacatggcccacgtagccggtctggtcgccgccggcctgtacccgaacccagtgccgctg
gctgacgtggtcaccaccaccacccacaagaccctgcgtggcccgcgtggcgggctgatc
ctcgccaaggccaacgaagagatcgagaagaagctcaacgctgccgtattcccaggcgcc
cagggcggcccgttgatgcacgtgatcgctgccaaggcggtgtgcttcaaggaagcgctg
gagcccggcttcaaggactaccaggcccaggtgatcaagaacgcccaggccatggcccag
gtgttcatcgaccgcggtttcgacgtggtctccggcggcaccgacaaccacctgttcctg
ctctcgctgatcaagcagggcatcaccggcaaggacgccgacgccgccctgggccgcgcc
ggcatcaccgtcaacaagaacgccgtacccaacgacccgcagtcgccgttcgtgacctcg
ggcctgcgcatcggcacgccagcggtcaccacccgcggcttcaaggaagcccagtgtcgt
gaactggcaggctggatcgccgacatcctcgagcacctcggcgacgccgatgtcgaggcc
caggtggctggtttggccgccggtctgtgcgccgattacccggtttaccgctga
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