Pseudomonas fulva: Psefu_4313
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Entry
Psefu_4313 CDS
T01501
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfv
Pseudomonas fulva
Pathway
pfv03030
DNA replication
pfv03410
Base excision repair
pfv03420
Nucleotide excision repair
pfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psefu_4313
03410 Base excision repair
Psefu_4313
03420 Nucleotide excision repair
Psefu_4313
03440 Homologous recombination
Psefu_4313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfv03032
]
Psefu_4313
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_4313
Enzymes [BR:
pfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psefu_4313
DNA replication proteins [BR:
pfv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Psefu_4313
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Psefu_4313
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psefu_4313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AEF24265
UniProt:
F6A9H5
LinkDB
All DBs
Position
complement(4706662..4709517)
Genome browser
AA seq
951 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTNSKGLPTGAVKGVLNMLRSLRRQYPDSPFAVVFD
AKGGTFRDELFADYKANRPPMPDELRLQVEPLHASVRGLGLPLLCVEGVEADDVIGTLAR
QSAAEGRDVVISTGDKDMAQLVCKHVTLVNTMTGSVYDIEGVKEKFGVGPELIIDYLALM
GDKIDNIPGVPGVGEKTALGLLVGVGGGLDVIYANLDKVPGLPIRGAKTLPAKLEEHREM
AYLSYQLATIKLDVPLDLNCSQLMPGEPDIEALTALYEQLEFKGWLDELLRQNKSAAPKT
KAAARSEMAPPAGDLFSATASADAGEVPAVQAAATPAAGEDQPSVVTGEYRTILDQGEFD
TLLEDLKQAELIAFDTETTSVDAQQAQLVGLSFAVKAGEAVYVPVAHSYMGVPQQLDRDA
VLRALKPILEDPAKAKVGQHAKYDINVLANASTPINVQGVAFDTMLESYVLDSTATRHDM
DSLSLKYLGHSTIRFEDIAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQNLWARLEE
IPSLAGVLRDIEIPLVPVLARIERNGALVDAKLLGEHSQELGEKLVALERQAFEVAGEEF
NLGSPKQLGAILYEKLGLPIISKTAKGQASTAEAVLAELAEQDYELPKVLMQYRSLSKLK
STYTDRLPEQINPRTGRIHTSYQQAVASTGRLSSSDPNLQNIPVRSAEGRRIRQAFVAPK
GYKLVSADYSQIELRIMAHLSRDEGLMNAFRDNLDVHTATAAEVFKVELDQVTNDQRRSA
KAINFGLIYGMGAQKLAKDIGVDGKTAKAYIETYFTRYPGVREYMDRTRHQAAEQGYVET
LFGRRLYLPAIKSSRPQERAGAERTAINAPMQGTAADIIKKAMVAVDEWLTESGLDARVI
LQVHDELVLEVREDLVEQVSVQIRPLMGETVKLDVPLLVEVGVGNNWDEAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcgtcctggtcgacggttcttcttatctgtaccgcgccttccac
gccctgccgccccttaccaactccaaaggcctgcccaccggtgccgtgaagggcgtgctg
aacatgctgcgcagcttgcgccgccagtacccagacagccccttcgcggtggtgttcgac
gccaagggcggcacctttcgcgacgagctgttcgcagactacaaggccaaccgcccgccg
atgcccgacgagctgcgcctgcaggtcgagccgctgcacgccagtgtgcgcggcctcggg
ctgccgctgctgtgcgtggagggcgtggaagccgacgacgtgatcggcaccctggcccgg
cagagcgccgccgaaggccgtgacgtggtgatctcgaccggcgacaaggacatggcgcag
ctggtgtgcaagcacgtcaccctggtcaacaccatgaccggcagtgtctacgacatcgag
ggcgtgaaggagaagttcggcgtcggccccgagctgatcatcgattacctggcgctgatg
ggcgacaagatcgacaacattcccggcgtgccgggcgtcggcgagaagaccgccttgggg
ctgctggtcggcgtcggcggcggcctcgacgtgatctacgccaacctcgacaaggtgccc
ggcctgccgattcgtggcgccaagaccctgcccgccaagctcgaagagcaccgcgagatg
gcctacctgtcctaccaactggcgaccatcaagctggacgtgccgctggacctgaactgc
tcgcagctgatgcccggcgagccggacatcgaggccctgaccgcgctttacgaacagctg
gagttcaagggctggctcgacgagctgctgcgccagaacaagtctgccgcacccaagacc
aaggcggctgcccgctccgaaatggcgccgcctgctggcgatttgttcagcgcgacggcc
agtgctgatgcgggcgaggtgccagcggtccaggctgctgccacgccggctgctggcgaa
gatcagccatcggtggtcaccggcgagtaccgcaccatcctcgaccagggcgagttcgac
accctgctggaagacctcaagcaggccgagctgatcgccttcgataccgaaaccaccagc
gtcgatgcccagcaggcgcagctggtcggcctgtccttcgcggtcaaggctggcgaggcg
gtgtacgtgccggtggcgcacagctacatgggtgtgccgcagcaactggatcgcgacgcg
gtgctgcgcgcgctcaagccgattctcgaagacccggccaaggccaaggtcggtcagcac
gccaagtacgacatcaacgtgctggccaatgccagcacgccgatcaacgtacagggcgtg
gccttcgacaccatgctcgaatcctacgtgctggactccaccgccacccgccacgacatg
gacagcctgtcgctcaagtacctgggccacagcaccatccgtttcgaggacatcgccggc
aagggtgccaagcagctgaccttcgaccagatcgccctcgagcaggccggcccgtacgcc
gccgaagatgccgacgtgaccctgcgcctgcaccagaacctgtgggcgcgcctggaagag
attccgagcctggccggcgtgctgcgcgatatcgagattcccctggtgccggtgcttgcg
cgcatcgagcgcaacggcgcgctggtcgatgccaagctgctcggtgagcacagccaggag
ctgggcgagaagctggtggcgctggagcgccaggcttttgaagtcgccggcgaagagttc
aacctcggctcgcccaagcagctgggcgccatcctctatgaaaagctcggtttgccgatc
atcagcaagaccgccaagggccaggcgtcgactgccgaagcggtgctcgccgaactggcc
gagcaggactacgagctgcccaaggtactgatgcagtaccgcagcctgagcaagctcaag
agcacctacaccgaccgcctgccggagcagatcaacccgcgcaccgggcgcatccacacc
agttatcaacaggccgtggcgtccaccgggcggctgtcgtccagcgacccgaacctgcag
aacatcccggtgcgcagcgccgaaggccggcgcattcggcaggccttcgtggcgccgaag
ggctacaagctggtgtcggcggactactcgcagatcgagctgcgcatcatggcgcacctg
tcccgcgacgaagggctgatgaacgccttccgcgacaacctcgacgtgcataccgccacg
gccgcagaagtcttcaaggtcgagctcgatcaggtgaccaacgaccagcggcgcagcgcc
aaggcgatcaacttcgggctgatctacggcatgggcgcgcagaagctggccaaggatatt
ggcgtcgatggcaagaccgccaaggcctacatcgaaacctacttcacccgttacccgggc
gtgcgcgagtacatggaccgcacccgccaccaggcggctgagcagggctacgtggaaacc
ctgttcggccggcgcctgtacctgccggcgatcaagtcgagccgcccgcaggaacgcgcc
ggcgccgagcgcacggcgatcaacgcgccgatgcagggcacggctgccgacatcatcaag
aaggctatggtcgctgtggatgaatggctgaccgaatccggcctggatgcccgggtgatc
ctgcaggtacacgatgagctggtactggaggttcgcgaggacctggtcgagcaggtcagc
gtgcagattcgcccgctgatgggcgaaaccgtgaagctcgatgtgccgctgctggtcgaa
gtcggcgtgggcaataactgggacgaagcgcactga
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