Pseudomonas simiae PCL1751: PF1751_v1c00800
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Entry
PF1751_v1c00800 CDS
T03766
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03030
DNA replication
pfw03410
Base excision repair
pfw03420
Nucleotide excision repair
pfw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PF1751_v1c00800 (polA)
03410 Base excision repair
PF1751_v1c00800 (polA)
03420 Nucleotide excision repair
PF1751_v1c00800 (polA)
03440 Homologous recombination
PF1751_v1c00800 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfw03032
]
PF1751_v1c00800 (polA)
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c00800 (polA)
Enzymes [BR:
pfw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PF1751_v1c00800 (polA)
DNA replication proteins [BR:
pfw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PF1751_v1c00800 (polA)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PF1751_v1c00800 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PF1751_v1c00800 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AJP49789
LinkDB
All DBs
Position
77741..80518
Genome browser
AA seq
925 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPNSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPSLPIRGAKTLPAKLEEHREM
AFLSYQLATIKCDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRVELKA
APAVEAVVETVAPTEASYTTILDQATFDIWLKKLNEATLFAFDTETTGIDAQQAQLVGVS
FAVQPHEAAYIPLTHSYIGAPQQLDRDTVLLALKPLLEDPTKLKVGQHAKFDMNILANCA
IGGDPAHGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVAFQDIAGKGAKQL
TFDQIALEQAGPYAAEDADITLRLHQELFAQLSAIPSLASVLTDIEIPLVPVLARIERQG
ALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEKLGLPVLKKTGK
GQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAV
AATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLSKDEGL
MNAFRDNLDVHTATAAEVFKVELGDVTSDQRRSAKAINFGLIYGMGAQKLGKDIGVDTKT
AKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERAAAERTA
INAPMQGTAADIIKKAMVRVDNWLTESGLDAKVILQVHDELVVEVREDLVAQVSEKIREH
MSAAAQLDVPLLVEVGVGNNWDEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcacccctcgtcctggtggacggttcttcctatctgtaccgcgcgttccac
gcgttgccaccgctgaccacctccaaaggcctgcccaccggcgcggtcaagggcgtgttg
aacatgctcaaaagcctgcgcaagcagtacccgaacagtccgttcgcggtggtgttcgac
gccaagggtgggacctttcgcgatgaaatgtacgccgaatacaaggccaaccgcccaagc
atgcctgatgacatgcgcctgcagatcgagccactgcaccagagcgtgatcgccctgggc
ttcccgttgctgtgcgtcgagggggtcgaagccgatgacgtgatcggcaccctggcccgc
agcagtgcggccgctgaccgcccggtggtgatttccaccggggacaaggacatggcacag
ctggtcgacgggcacattaccttggtcaacaccatgaccggtagcgcgatggacatcgag
ggcgtgaaggagaaattcggtgtcgctcccgagcagatcatcgactatctggcgttgatg
ggcgattcatccgacaacattccaggcgttccgggcattggtccgaaaaccgcttccggc
ttacttgtcggcgtgaatggcggcatcaaagagctttatgagcagttggacatcgtaccg
tccctgcctattcgtggcgccaaaacactgcccgccaagctggaagaacatcgggagatg
gcgtttctttcctaccagttggcgacgatcaagtgtgatgtgccattggatgtcggcctg
gatgacctgcacctgatcgagccggatcgcgagaagctgctggagctgtacacgctgctg
gagttcaagagctggtttgatgaaatccagcgcgacgccaagcgcgtagaactcaaggcg
gcccctgcagttgaagccgttgttgaaacagtggcgccaacagaggcgagctacaccacc
atcctcgaccaggcgaccttcgatatctggctgaaaaagctcaacgaagcgacgttgttt
gctttcgataccgaaaccaccggtatcgacgcccaacaggcgcagttggtgggtgtttcc
ttcgccgtccagccccatgaggcggcctacattccgctgacccattcctacataggcgcg
ccgcagcagttggatcgcgacaccgtgctcctggccctcaagccactgttggaagacccg
accaagctcaaggtcggccagcatgccaagttcgacatgaatatcctggccaactgcgcc
atcggcggcgacccggcacacggcattaccgtgcgcggcatcgcctttgacaccatgctc
gaatcctatgtattgaactccaccgcaacacggcatgacatggacagtctggccaagaag
tacctggactacgacaccgtcgctttccaggacatcgccggcaagggcgccaagcagctg
acgttcgaccagatcgcgttggagcaggctggcccgtatgcggcggaagacgccgatatc
accttgcgcctgcaccaggagctgtttgcacaacttagcgcgatcccgagcctggcgagt
gtgctcacggatatcgaaatcccgttggtgccggtgctggcccgtatcgagcgtcagggc
gcactggtcgacaaggatctgctgggcatccagagcatcgagctgggcaacaagatggtc
gaactggagcgacaggcgttcgagatcgctggcgaggagttcaacctgggctcgcccaag
caacttggcgcgatcctttacgaaaagctcggcctgccggtactgaaaaaaaccggcaag
ggccaagcctctacggctgaagaggtgctagccaagctggccgaggatgattacccgctg
ccaaaggtgctgatgcagtaccgcagcatgagcaagctcaaaagcacctacaccgaccgg
ctgccggagcagatcaacccgcgcaccgggcgcatccacacctcttatcaccaggcggtg
gcggcgaccgggcggttgtcctccagtgatccgaacctgcagaacattccggtgcgtacc
gccgaagggcggcggatccgtcaggcgttcgtcgcgcccaagggctacaagctactggcg
gcggactactcgcagatcgagctgcggatcatggcgcacctgtccaaggacgaaggcttg
atgaatgccttccgcgacaacctggacgtgcacaccgctacggcggccgaggtgttcaag
gttgaattgggcgacgtcacttcggatcagcgtcgcagtgccaaggcgatcaactttggc
ctgatctacggcatgggggcgcagaagctgggcaaggacattggcgtcgataccaagacc
gccaaggcgtatatcgatgtgtatttcgcccgttatcctggcgttcgcgaatacatggag
cgcacgcgtgcccaggcggctgatcaaggttatgtcgagacgttcttcggccgtcgcctg
tacttgccggatatcaactcaaacaagccccaggagcgcgcagcggcagagcgtactgcg
atcaacgcgccgatgcagggtacggcggcggatatcatcaagaaggccatggtgcgagtg
gacaactggctgaccgagtccgggctggatgccaaagtgatcctgcaggtgcacgatgaa
ctggtggttgaggtgcgtgaggacctggtggcgcaagtcagcgagaaaatccgcgagcac
atgagtgctgctgcgcagttggacgtgccgctgctggtggaagtgggcgtgggcaacaac
tgggacgaagcgcactga
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