KEGG   Pseudomonas simiae PCL1751: PF1751_v1c04800
Entry
PF1751_v1c04800   CDS       T03766                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pfw  Pseudomonas simiae PCL1751
Pathway
pfw03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pfw00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PF1751_v1c04800 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfw03019]
    PF1751_v1c04800 (orn)
   03009 Ribosome biogenesis [BR:pfw03009]
    PF1751_v1c04800 (orn)
Messenger RNA biogenesis [BR:pfw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PF1751_v1c04800 (orn)
Ribosome biogenesis [BR:pfw03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    PF1751_v1c04800 (orn)
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AJP50187
UniProt: A0A0D0THD7
LinkDB
Position
562289..562831
AA seq 180 aa
MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKA
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccctgac
accgacgtcatcatcgaaatggcgacgattgtcaccgacagcaacctcaacaccttggcc
gaagggccggtgattgccatccaccacagcgacgccgtcctcgccaccatggacgagtgg
aatacccgcactcatggcaactccggcctgacccagcgcgtgcgcgacagccgtatcagc
atggccgaagcagaagccgagaccatcgccttcctggaaaagtgggtgcccaagggcaag
tcgccgatctgcggcaacagcatctgccaggatcgtcgcttcctttatacgcatatgaaa
gcgctggaaagctacttccactaccgcaacctggatgtgtccacgcttaaagagctggct
gcgcgttgggcgccggaagtcaaagacagcttccataaaggcagcacgcacttggcgctg
gatgatattcgcgagtcgattgccgagctgcagcattaccgcaagcatttcatcaaggcc
tga

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