Pseudomonas simiae PCL1751: PF1751_v1c04800
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Entry
PF1751_v1c04800 CDS
T03766
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PF1751_v1c04800 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfw03019
]
PF1751_v1c04800 (orn)
03009 Ribosome biogenesis [BR:
pfw03009
]
PF1751_v1c04800 (orn)
Messenger RNA biogenesis [BR:
pfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PF1751_v1c04800 (orn)
Ribosome biogenesis [BR:
pfw03009
]
Eukaryotic type
Pre-60S particles
RNases
PF1751_v1c04800 (orn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJP50187
UniProt:
A0A0D0THD7
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All DBs
Position
562289..562831
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccctgac
accgacgtcatcatcgaaatggcgacgattgtcaccgacagcaacctcaacaccttggcc
gaagggccggtgattgccatccaccacagcgacgccgtcctcgccaccatggacgagtgg
aatacccgcactcatggcaactccggcctgacccagcgcgtgcgcgacagccgtatcagc
atggccgaagcagaagccgagaccatcgccttcctggaaaagtgggtgcccaagggcaag
tcgccgatctgcggcaacagcatctgccaggatcgtcgcttcctttatacgcatatgaaa
gcgctggaaagctacttccactaccgcaacctggatgtgtccacgcttaaagagctggct
gcgcgttgggcgccggaagtcaaagacagcttccataaaggcagcacgcacttggcgctg
gatgatattcgcgagtcgattgccgagctgcagcattaccgcaagcatttcatcaaggcc
tga
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