Pseudomonas simiae PCL1751: PF1751_v1c07190
Help
Entry
PF1751_v1c07190 CDS
T03766
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pfw
Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c07190 (phrB)
Enzymes [BR:
pfw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PF1751_v1c07190 (phrB)
DNA repair and recombination proteins [BR:
pfw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PF1751_v1c07190 (phrB)
Prokaryotic type
PF1751_v1c07190 (phrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CAP59_mtransfer
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
AJP50425
LinkDB
All DBs
Position
complement(833220..834665)
Genome browser
AA seq
481 aa
AA seq
DB search
MHLIWLRTDLRLHDNTALAAASQRGPIAAVYLITPQQWQSHDDAPCKVDFWLRNLQDLSK
TLGALNIPLLIRTAATWDQAPDVLSKLCRELSAESVHVNEEYGIHESRRDAAVYKALEAD
GVTFHRYLDQLFFQPGSVLTKTGTYFQVFSQFRKVCYTRLHSALPRMVAAPKAQAPLKLK
SDPVPNTVEGFAPPSDSLRALWPAGEDEARRRLDAFADQQISYYKDERDFPAKPGTSQLS
AYLAAGVVSPRQCLHAALQTNGGEFESGDLGAITWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRNAPKDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDAEGVFIK
HWLPELAALNKKDVHNPEAAGGLFGVADYPRSIVDLKKSRERALAAFRNLPSRQAAGGDY
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgatctggctgcgcaccgacctgcgcctgcacgacaacactgctctggccgcc
gcgagccagcggggcccgattgcggccgtgtacctgatcacgccgcagcaatggcagtcc
cacgatgatgcgccgtgcaaagtggacttctggctgcgcaacctgcaagacctgagcaaa
acgctgggcgcgctgaatattcccctgctgatccgcaccgcagccacttgggaccaagcg
cccgacgtactgagcaagctgtgccgcgagctgtcggcggagtcggtgcacgtcaacgaa
gaatatggcattcacgaaagtcgtcgtgatgctgccgtgtacaaggctttggaagccgat
ggcgtgaccttccaccgttacctcgatcaactgttcttccaacccggcagtgtgctgacc
aagaccggtacatatttccaggtgttcagccaattccgtaaagtctgctacacccgcctg
cacagcgccctgccgcgcatggttgcagcgccaaaggcccaggcgccgctcaagctgaaa
agcgatcccgtcccgaacacagtcgaaggtttcgccccacccagcgacagcctgcgcgcc
ctctggccagccggtgaagacgaagcccggcggcgcctcgatgccttcgccgatcagcaa
atcagctactacaaagacgaacgcgacttccccgcgaaacccggtaccagccagttgtct
gcctaccttgcagcgggcgtcgtttcgccgcgacagtgcctgcatgccgcgctgcaaacc
aacggcggcgagttcgaaagtggcgacctgggcgccatcacctggatcaatgaattgctg
tggcgcgagttctacaaacacatcctggtcggttacccacgggtgtcgcgccaccgcgcg
ttccgcccggaaaccgaagccgtggcctggcgcaacgcgcccaaggacctcgccgcctgg
caggaagcgcgcaccggcttgccgatcatcgatgcggccatgcgccaactgctggaaacc
ggctggatgcataaccgcctgcgcatggtggtggcgatgttcctgaccaagaacctgctg
attgactggcgcgaaggcgagcgttttttcatgcgccacctgatcgacggcgacctggcg
gcgaacaacggcggctggcagtggagttcatccaccggcaccgactccgcgccatacttt
cggattttcagcccgttgagccaatcggagaaattcgacgctgaaggcgtgttcatcaag
cactggctgccggaactggccgcgctgaataaaaaggacgtgcacaaccccgaagccgcc
ggcggcctgttcggcgtggctgactacccgcgctcgatcgtcgacctgaaaaaatcccgt
gaacgtgcgctggccgctttccgcaacctgccctcgcgccaagccgcagggggcgactat
gagtga
DBGET
integrated database retrieval system
