Pseudomonas simiae PCL1751: PF1751_v1c16100
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Entry
PF1751_v1c16100 CDS
T03766
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfw
Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfw03032
]
PF1751_v1c16100 (gyrA)
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c16100 (gyrA)
Enzymes [BR:
pfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PF1751_v1c16100 (gyrA)
DNA replication proteins [BR:
pfw03032
]
Prokaryotic type
DNA Topoisomerases
PF1751_v1c16100 (gyrA)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PF1751_v1c16100 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJP51313
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Position
1791949..1794603
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AA seq
884 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VVAMVERAGADSCRPETLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILSSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGLERV
QEPSEVEGEELEGEEFEGEVIAAGDDNVDEPTLDAAADEEEPQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaattgtcggtcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcaccggcgtgtgctgttcgcgatgagcgagctgggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcaccctcac
ggcgacactgcggtgtacgacaccatcgttcggatggcccagccgttttccctgcgctac
ctgctggtagacggccagggcaacttcggttcggtcgacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcatgagctgctggccgacctgcataaa
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
accaagatccccaacctgctggtcaacggttccagcggtatcgccgtgggcatggccacc
aacatcccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaac
ccggagctgaccgtcgatgagctgatgcaatacatccccggcccggacttcccgactgcc
gcgatcatcaacggtcgcgccggcatcatcgaagcctaccgcaccggtcgcggccgcatt
tacatgcgcgcccgctcgatcatcgaagacatcgacaaggtcggtggccgccagcagatc
gttatcaccgaactgccgtaccagctgaacaaggcgcgcctgatcgagaagatcgccgag
ctggtcaaagagaagaagctcgaaggcatcaccgaactgcgcgacgagtccgacaaagac
ggtatgcgcgtggtgatcgagctgcgtcgtggcgaagtgcctgaggtgatcctcaacaac
ctctatgcccagacccagctgcaaagcgtgtttggtatcaacgtggttgcgctgatcgac
ggccgcccgcgcatcctgaacctcaaggacctgctggaagccttcgtgcgtcaccgtcgc
gaagtggtcacacgccgcaccgtgttcgaactgcgcaaggcccgcgagcgcggccacatc
ctggaaggccaggcagttgcgctgtcgaacatcgacccggtaatcgccctgatcaaggcc
tcgccaaccccgtcggaagccaaggaagcgttgatcagcacgccttgggaatccagcgcc
gtggtggccatggttgaacgtgccggcgccgactcgtgccgtccggagaccctggacccg
caatacggtctgcgcgaaggcaagtacttcctgtcgccggaacaggcccaggccatcctg
gagttgcgcctgcaccgcctgaccggtctggagcacgagaagctgctggccgagtaccag
gagatcctcaaccagatcggcgagttgatccgcatcctcagcagcgccgtgcgcctgatg
gaagtgatccgcgaagaactggaagtgatccgcgccgaatacggtgacgtgcgccgtacc
gaaatcctcgatgcgcgcctcgacctgaccctgggtgacatgatcccggaagaagagcgt
gtggtgaccatctcccacggtggctacgccaagacccagccattggctgcgtaccaggcc
cagcgtcgtggtggtaaaggtaaatcggcgaccggcgtgaaggatgaggactacattgct
cacctgttggtcgccaacagccacaccacgctgctgctgttctccagcaaaggcaaggtg
tactggctgaaaacctacgaaatcccggaagcgtcccgtgctgcccgtggtcgcccactg
gtcaacctgctgccactggacagtgatgaatacatcaccaccatgctgccggtcgaggaa
tacaccgaaggtcacttcatcttcatggccaccgccaaaggcaccgtgaagaagaccccg
ctggaatccttcagccgtcagcgcagcgtgggcctgatcgccctggagctggacgaaggc
gacgtgctgatctctgcggccatcaccgatggcgagcgtgaagtcatgctgttctccgac
ggcggcaaggtcacgcgcttcaaggaatccgacgttcgcgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgcctgccagaagggcagaagctgatttcgatgctgatcccggaa
gaaggcagccagatcctcaccgcttccgagcgcggttatggcaaacgcaccgccatcagc
gagttcccggagtataagcgtggcggccaaggcgtgatcgccatggtcagcaacgaccgc
aatggccgtctggtcggcgcggtccaggtgctcgatggcgaggagatcatgctgatttcc
gaccagggcaccctggtacgtacccgtgtggctgaagtgtcgagcctgggccgtaatacc
cagggcgtcaccctgatcaagctggccaaggacgagaaactggtcggcctggagcgtgtc
caggagccatcggaagtcgaaggcgaagagctggaaggcgaggaattcgaaggcgaggtg
atcgcagcaggcgatgacaacgtcgacgagccaaccctcgacgctgccgcagacgaagaa
gaaccgcaggaataa
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