Pseudomonas simiae PCL1751: PF1751_v1c17900
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Entry
PF1751_v1c17900 CDS
T03766
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw00061
Fatty acid biosynthesis
pfw00071
Fatty acid degradation
pfw01100
Metabolic pathways
pfw01212
Fatty acid metabolism
pfw02024
Quorum sensing
pfw04146
Peroxisome
Module
pfw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PF1751_v1c17900
00071 Fatty acid degradation
PF1751_v1c17900
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PF1751_v1c17900
09145 Cellular community - prokaryotes
02024 Quorum sensing
PF1751_v1c17900
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfw01004
]
PF1751_v1c17900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfw04147
]
PF1751_v1c17900
Enzymes [BR:
pfw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PF1751_v1c17900
Lipid biosynthesis proteins [BR:
pfw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PF1751_v1c17900
Exosome [BR:
pfw04147
]
Exosomal proteins
Exosomal proteins of breast milk
PF1751_v1c17900
Exosomal proteins of breast cancer cells
PF1751_v1c17900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
DUF5397
Motif
Other DBs
NCBI-ProteinID:
AJP51493
LinkDB
All DBs
Position
1980989..1982638
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AA seq
549 aa
AA seq
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MPVAFRLPLQVFFEREARHPRQTFLVQPVGDGEVQSLTWGDVGHQARCAANWLRARELPQ
GSHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAHVLTHSEAALVLIGKLDDW
PAMAPGVPKDVPTISLPLCPSGEFDFSWADLQASSPIQDDPAPAASDLATIIYTSGTTGL
PKGVMHSFGALGFAATRGTALFGLGEGDRLLSYLPLCHVAERMFVEMASIYTGQTVFFAE
SLETFLVDLRRARPTALFGVPRIWTKFQMGVYAKVPAKRLDTLLRLPFIGKRVGHKVLAG
LGLDALRIALSGAAPVPEALLRWYRRLGLDVLEVYGMTESCGYSHVCRPGQQTLGWIGLP
CPGVEVRIDPAGEVQVRSGATMLGYYKDPQKTAETITADGFLRTGDKGEQDTEGRLRLTG
RLKEIFKTSKGKYVAPAPIENRLAEHARIEQVCVVGDGLSAPIGLCVLSAVEQDPQALRS
SLERWLVQVNQTLDKHERLRQLVVVKDSWAVENGFLTPTLKIKRNAIESTYGEYFQRWSE
RSETVLWQD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgcttttcgtttgccgttgcaggtcttcttcgaacgtgaagcgcgacatccg
cgccaaacctttctggtgcagcccgtcggtgatggcgaggtgcaaagccttacctggggc
gacgttggccaccaggctcgctgcgccgcgaactggctgcgcgcccgggagttgccccag
ggctcgcacattgcgttgatctcgaaaaactgcgcccactggatcattgccgacctggcg
atctggatggctgggcatgtctcggtgccgctctaccccaacctcaccgctgattccgtt
gcccatgtgctgactcattccgaggcggcgctggtgttgatcggcaagcttgatgattgg
ccagccatggcgcccggtgtgcctaaggatgtgccgaccatcagcctgccgttgtgcccg
tcgggcgagttcgatttcagttgggccgatctgcaggcctcctcgccgattcaggatgac
ccggcgccggccgcctcggacctggccaccatcatttatacctccggtaccacgggcctg
cccaaaggcgtgatgcacagcttcggcgcgctggggtttgccgcgacccgtggtacggcg
ttgtttggcttgggtgagggcgaccgcttgttgtcctacctgccgctgtgccacgtggcg
gagcggatgtttgtggaaatggcctcgatctacaccgggcaaacagtgtttttcgccgaa
agcctggagacgtttctggtggacctacgcagggcgcgtccgaccgcactgtttggcgtg
ccgcgcatctggaccaaattccagatgggcgtctacgccaaggttccggcaaaacgcctg
gacaccttgctgcgcctgccgttcatcggcaagcgtgtgggccacaaggtgctcgccggc
ctgggcttggacgcgttgcgtatcgcgctttcgggggcagcgcctgtgcctgaagcgctg
ctgcgctggtatcggcggctgggcctggacgtgcttgaggtgtatggcatgaccgagagt
tgcggctactcccatgtttgccgccccggccagcaaaccctcggctggatcggcctgccg
tgccccggtgttgaagtgcgtatcgatcctgcgggggaagtgcaggtgcggagcggtgcg
accatgctcggctactacaaggacccgcagaaaaccgccgagacgatcaccgccgatggc
ttcctgcgcacgggggacaaaggcgagcaggacaccgagggccgcctgcgcctgaccgga
cggctgaaggagatcttcaagaccagcaagggcaaatacgtggccccggcgccgatcgaa
aaccgcctggccgaacatgcgcgtatcgagcaggtgtgtgtggtgggggatgggttgagc
gcgcctattggtttgtgcgtattgtcggcggtggaacaggacccgcaagcgctgcgcagc
agtcttgaacgttggttggtacaggtcaaccagacgctggacaagcatgagcgcctgcgc
caactggtggtggtgaaagacagttgggcagtggaaaacggctttttgacgccgaccttg
aagatcaaacgcaacgcgatcgaatcgacttacggtgaatatttccagcggtggagcgag
cgttccgaaacggttctgtggcaggattag
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