Pseudomonas simiae PCL1751: PF1751_v1c26660
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Entry
PF1751_v1c26660 CDS
T03766
Symbol
oprD
Name
(GenBank) outer membrane porin OprD
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw01501
beta-Lactam resistance
pfw02020
Two-component system
Module
pfw_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PF1751_v1c26660 (oprD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PF1751_v1c26660 (oprD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfw02000
]
PF1751_v1c26660 (oprD)
01504 Antimicrobial resistance genes [BR:
pfw01504
]
PF1751_v1c26660 (oprD)
Transporters [BR:
pfw02000
]
Other transporters
Pores ion channels [TC:
1
]
PF1751_v1c26660 (oprD)
Antimicrobial resistance genes [BR:
pfw01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PF1751_v1c26660 (oprD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AJP52366
LinkDB
All DBs
Position
complement(3009243..3010565)
Genome browser
AA seq
440 aa
AA seq
DB search
MIKQSSLLALAVCAGISQMAFAESVTDQADSKGFIEGSSVTGLLRNYYMNRNREGGRADN
IDWTQGAMLNYASGFTQGTIGFGVDAYAYGGLKLDATHADAGTGNLPTDRHGDPEDAYGS
VGAAVKIKVSKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTS
TNSGMTSNHDHDIYATYANIAANSASFLGGKYTFSPSLSATVYAGELEDIWRQYYTNLNY
VIPLAHDQSLALDGNLYRTLDTGSAKAGAINNTTYSLAAAYSFLQAHTLTLSFQKVHGDT
PFDYIGTGNNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGRY
INGSDINGTHTPDHSAYAGDYGDDGAHHETDLEAKYVIQSGPAKNLSLRVRDAIVAANAD
QRDGDLNELRLIVDYPFTLL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacagtcgagcctgttagcactggcggtgtgtgccggtatcagtcagatggcg
tttgccgagtcggtcaccgaccaggcggactccaaggggtttatcgagggcagcagcgtc
accgggttgttgcgcaactactacatgaatcgcaatcgcgaaggcggacgggccgataac
atcgactggacccagggcgcgatgctcaactacgcctcgggtttcacccagggcaccatc
ggcttcggcgttgacgcctacgcctatggcgggttgaaacttgacgccacccacgcggac
gccggcaccggcaacctgccgaccgaccggcatggcgaccccgaagacgcctacggctcc
gtgggcgcggcggtgaagatcaaagtctccaagacccagctcaaattcggcgacatgcag
cccaccgccccggtcttcgccaccggcggcacgcgcctgttgccgcagaccgctaccggt
ttcgacctgaccagcagcgaaatcgccgggctggacctggaagccgggcacttcaccagc
accaacagtggcatgaccagcaaccatgatcacgatatctacgcgacctacgccaatatc
gcggccaacagtgcaagtttcctcgggggcaagtacaccttcagcccatccctcagcgca
acggtgtatgccggtgagttggaagacatctggcgccagtactataccaacctcaactac
gtgatcccgctggcccatgaccagtcactcgcgctggacggcaacctctaccgcaccctc
gacaccggcagcgccaaggccggggcgatcaacaacaccacctactcgttggcggcggcg
tactcgttcctgcaggcgcatacgctgacgctgtcgttccagaaagtgcatggcgacacg
ccgtttgactacatcggcaccggcaacaacggcgcgggcgaaggcggcgactcggtctac
ctggccaactcggtgcaatggggggacttcaacgggccgggcgaacagtcctgggggatc
cgttatgacctgaacatggccagttatggcgtgccgggactgagtttcatggggcgctat
atcaacggttcggatatcaatggcacccacacgccggatcacagcgcctatgcgggcgac
tacggtgacgacggcgcgcaccacgaaacggatcttgaggccaagtacgtgatccagagt
ggtccggcgaaaaacctgtcgttgcgcgtgcgtgatgcgatcgtggcagcaaacgccgac
cagcgcgatggcgacctgaacgagctgcggctgatcgtcgactatccgtttaccctgcta
tag
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