Pseudomonas simiae PCL1751: PF1751_v1c27560
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Entry
PF1751_v1c27560 CDS
T03766
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfw
Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfw03032
]
PF1751_v1c27560
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c27560
Enzymes [BR:
pfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PF1751_v1c27560
DNA replication proteins [BR:
pfw03032
]
Prokaryotic type
DNA Topoisomerases
PF1751_v1c27560
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PF1751_v1c27560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AJP52456
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All DBs
Position
3116271..3117308
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AA seq
345 aa
AA seq
DB search
MSDSALPRDLHYVDDTQPGIRRKTVRGGFQYFDPQGVRITDAEEIKRLNALAVPPAYTDV
WICADPRGHLQATGRDARGRKQYRYHPRWREVRDSDKYSRLQEFGNALPKLRKQLEAKIA
EPGFTREKVLATVVMLLDATLIRVGNTQYARDNKSYGLTTLRTRHVDVKGSEIQFQFRGK
SGVEHQISVKDRRLATVVKRCLELPGQNLFQYLDEDGERHTVSSHDVNDYLHSLTGADFT
AKDYRTWAGTAMALAVLRELEWQPESDAKRHVVAMVKDVAKQLGNTPAVCRKCYIHPAVL
EHFSLGELSKLPKPRLRKGLKAEEVALAMFLEQLAADLPKKAKTG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactctgcactgccccgcgacctgcattacgttgacgacacccagcccggcatc
cgccgtaagacagtgcggggcgggttccaatacttcgacccccagggcgtgcgcattacc
gatgccgaggagatcaagcgcctgaacgccctggcggtcccgcctgcgtacaccgacgta
tggatctgcgccgacccgcgcgggcatctgcaagccaccggccgcgacgcccgtggccgt
aagcaataccgttatcacccacgctggcgcgaggtgcgcgacagtgacaagtactcccgg
ttgcaggagttcggcaacgccctgccgaaattgcgcaagcagttggaggcaaaaatcgcc
gaacccggcttcacccgtgaaaaagtcttggccacggtggtgatgctgctcgacgccaca
ctgatccgcgtcggcaatacccagtatgcgcgggacaacaaatcctacgggctgaccacc
ctgcgcacccgccatgtggatgtgaaaggcagcgaaatccagttccagtttcgcggcaag
agtggcgtggagcaccagatcagcgtcaaggaccgccgcttggccacggtggtcaagcgc
tgcctggaattgccagggcagaacctgttccagtacctggacgaggatggcgagcgccac
accgtcagctcccacgacgtgaatgactacctgcacagcctcactggcgccgacttcacc
gccaaggactaccgcacctgggccggcaccgccatggcgctggccgtgttgcgggaattg
gagtggcagcccgagtccgatgccaaaaggcacgtggtggcgatggtcaaggatgtcgcc
aagcagctgggtaacaccccggcggtgtgccgcaagtgttacatccaccctgcggtgctg
gagcatttcagcctcggcgaactctccaaattgcccaagccgcggttgcgcaaagggctc
aaggctgaagaagtggccttggcgatgttccttgagcaactggcggcggacttgccgaaa
aaagccaagacgggttag
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