Pseudomonas simiae PCL1751: PF1751_v1c29440
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Entry
PF1751_v1c29440 CDS
T03766
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pfw
Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c29440 (sbcD)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PF1751_v1c29440 (sbcD)
Archaeal homologous recombinant proteins
PF1751_v1c29440 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AJP52644
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Position
3322474..3323715
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AA seq
413 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLKTHLPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPKLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLIPLPDAKGKIAAWCLALPFLRPAEVTGAHLGDDYLRGIGQVHEWLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFDRSVAYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVTFQGQCLVSVEPLLIPRSVDLQRLEAAPLADILKAL
AELPDIDLLAETQRHPWLEVRVRLDEPQPDLRQQIESTLQGKAVRLVRIAAEYAGTGSRE
DEGDDRLIDLDQLTPQELFSRAWQDSYGSDVDEQTLKDFAVLLQEVQQEGEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctgggccaaaacctccatggccaggaacgc
gacttcgaacacgcctgtttccttgagtggctgctgggccaactgaaaacccatctcccg
gatgtgctgctgatcgccggtgatatcttcgacacggtcaacccgcccctcaaggcccag
gagcggctgtatgacttcatcatcagcgcccatgaacagaaccccaagctgaccatcgtg
atgatcgccggcaaccacgattccggctcgcgtatcgagctgcccgcgccgttgatgcgg
cgcctgcgtacccatgcgctgggccgcgtgctgtggctggatgacggccaactcgacgcc
gaacgcctgctgatcccgctgccggatgccaaaggcaagattgccgcctggtgcctggcg
ttgccgttcctgcgtccggcggaagtcaccggtgcgcacttgggtgacgactacctgcgc
ggcatcggccaggtgcatgaatggctgatcgccgccgccaacgccaagcgcaaaaaaggc
caggcgctgattgccatcagccacgcgcacatggccggtggttcggtgtcggaagactcc
gagcgcagcctgatcatcggcaatgccgaggcgctgccggccagcctgttcgatagaagt
gtcgcctacgttgccctcggccatttgcacaagccgcaaaaggtcaatggcgaagaacgc
attcgctacagcggctcgccgattccgctgtcgttttccgaaatcggctataaacaccag
attctcgacgtgacgtttcagggccaatgcctggtgagtgtcgaaccgctgctgatcccc
cgctcggtcgacctgcaacgcctggaagccgcgcccctggccgatatcctcaaggccttg
gccgagttgccggatatcgacctgcttgccgaaacccagcgccacccctggctcgaagtt
cgcgtacgcctggatgaaccacaacccgatctgcgtcagcagatcgaaagcaccctgcaa
ggcaaggccgtgcgcctggtgcgcatcgccgccgaatacgccggtaccggcagccgtgag
gacgaaggcgacgaccgcctgatcgatctcgaccagctcacgccccaggaattgttcagc
cgcgcctggcaggacagttatggcagtgacgtggatgaacagaccttgaaggacttcgcc
gtgctgctccaggaagtgcaacaggagggcgaacagccatga
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