Pseudomonas simiae PCL1751: PF1751_v1c29450
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Entry
PF1751_v1c29450 CDS
T03766
Symbol
sbcC
Name
(GenBank) exonuclease SbcCD, subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfw
Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c29450 (sbcC)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PF1751_v1c29450 (sbcC)
Archaeal homologous recombinant proteins
PF1751_v1c29450 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Snapin_Pallidin
ABC_tran
nSTAND3
ATS
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJP52645
LinkDB
All DBs
Position
3323712..3327350
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADSDISIGDPRTLLRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQNSRQSLIDLDSDQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKEAREAHKQLQDQATGVVPLAAEARAELDQQFD
AAQQHLKTQQAQLKQLELQHTWLKELREWQERQLAATEQLQRAQAEWDNQVQQRDDLSRL
DQLAPQRHQFARQAELSTLLAPLAAQIQLHRQQQGELHTRQEQAQQQQASAQTALAQALK
NQADAVPLLRQAFEEQSTLAHLTKELAKRIEDKQQHESACIEGQRQLTGLLEKQNQVAER
LQRLSTELDRSAALAPLSDAWTAYRDRLQQLMLIGNRLNKGQAELPQLEQRATSAAEQFT
QQREALDLLYQEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLTRLWDNQQQLDQQAAT
LTQKLTDAQQQREQLNQAGLQTKAELSVAEQTLNVTKQLLERQRLARSASVEELREQLQD
DQPCPVCGSHEHPYHQPEALLQSLGRHDENEEAAAQKAVDTLKEKLTELRGEVGGLIAQQ
KEYLQQQEHLATQQQALKPSLDAHPLYASLLNQETAKRSAWLEQQLGQLTQSISQDEQRQ
GALLNLQQNAGRLQQQLQAAQDASQQARQLLVDQQRELAGDRERLDQELSAFANLLPADT
LEGLRAEPAATFMQLDQQVNQRLEQLGHQRDELAEQQDRQQAIEKEQTHQQHRQQQLDAL
LQQVNELASQQQTAQAKLSALLGEHSSAEHWQQQLEQAVTQSRQSETDANKQLQEIHNAL
IELAADLKAQQEREHALQAEHHALATRISEWRALHPELDDAGLSHLLAYDDAQVSQLRQQ
LQLSEKAVEQAKVLLQEREQRLADHQALHNGNLEAQALDSALATLNQQLAEGEKICAELR
ARQSEDQRRQEANQAFAEHIAKAYDEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctgaaaaacctcgcctccctggcgggcccgtttgagatc
gacttcaccgccgagccgctggccagtgccggtttgttcgcgattaccgggccgaccggc
gccggtaaaagtaccctgctcgatgccttgtgcctggcgctgtttggcgcggtgccgcgc
ctgggcgataccggccaggcgaagatgccggatgccgacagcgacatttccattggtgac
ccgcgcaccttgctgcggcgtggcaccggtggcggttatgccgaggtggacttcgtcggc
gtcagtggccgtcgctaccgcgcacgctgggaagccaaccgcgcacgggacaaagccagc
ggtaaattgcagaacagccgccaaagcctgatcgacctggacagtgaccaactgctggcc
agccagaaaaccgaatacaagacccaactggaactggccctgggcctgaacttcgaacag
ttcacccgtgccgtgttgctcgctcaaagtgagttcagcgccttcctcaaggccaacgac
aatgagcgcagcgaactgctggaaaaactcaccgacacagccctttacacccagctcggt
cggcgcgcgttcgacaaggccaaagaggccagggaagcgcataaacagctacaggaccag
gcgaccggtgtggtgccgctggccgccgaagcccgtgccgaactggatcagcaattcgac
gcggcgcaacaacacctcaagacccagcaagcccagctcaagcagctggagttgcagcac
acctggctcaaggaactgcgcgaatggcaagagcgccaactcgccgctaccgaacagcta
cagcgggcgcaggccgagtgggataaccaggtccagcaacgtgacgacctgagccgcctg
gatcagttggcgccacagcgtcaccagtttgcgcgccaggcagagctgagcaccctgctt
gcgccgctggccgcgcagatccagttgcatcgccaacaacaaggcgaactgcatactcgc
caggaacaggcccaacaacagcaagccagcgcgcaaaccgcattggcgcaagccctgaaa
aaccaggctgatgccgtgcctttgctgcgccaggcgttcgaagaacagagcaccctcgcc
cacttgaccaaagagttggcaaagcgcatcgaggacaaacagcaacacgaaagcgcctgc
atcgaaggccagcgccagctcactggcctgctggaaaaacagaaccaggtcgccgaacgc
ttgcaacgcctgagcaccgagcttgaccgcagcgcggcgctggcaccgctgagcgacgcc
tggaccgcctaccgcgaccgcttgcaacagttgatgctgataggcaaccgcctgaataaa
ggccaagccgaactgccgcagttggagcaacgtgcgaccagcgccgccgaacagttcacc
cagcaacgcgaagccttggacctgctgtatcaggaggccggtgccgagcctcacgccgtg
gccgaacagatccaactactggccagcctgctgcaagacaatcgcaaacagcagcgcgcg
ttcgaagatctgacacgcctgtgggacaaccagcagcagttggaccaacaagccgctacc
ttgacgcaaaagctcaccgatgcccaacagcagcgcgagcagttgaaccaggccggcctg
caaaccaaggcagagctgagcgttgccgaacagacgctaaacgtgaccaaacagctgctg
gaacgccagcgcctggcccgcagcgccagcgtcgaagagttgcgcgagcagttgcaggac
gaccagccctgcccggtgtgcggcagccacgaacatccgtaccaccagcccgaagccctg
ttgcaaagcctcggtcgtcatgacgaaaacgaagaagccgcggcgcagaaagcggtcgat
acactcaaggaaaagctcaccgagttgcgtggcgaagtgggcggtttgatcgcccagcag
aaggaatacctgcaacagcaggaacacctggcgacgcaacagcaagcactcaagccgagc
ctggatgcacacccgctgtacgcgtcgttgctcaaccaggaaactgcgaaacgcagcgcc
tggctcgaacagcaactgggccaactgacccagagcatcagccaggacgaacaacgccaa
ggcgccctgcttaatctgcaacaaaacgccgggcgcctgcagcagcagttgcaagccgcc
caggacgcgagccagcaagcccgtcaactgttggtcgaccagcaacgcgagctggccggt
gaccgcgaacgccttgaccaggaactgagcgccttcgccaacctgctgcccgcggacacc
ctggaaggtctgcgcgccgagccggccgccaccttcatgcagctggaccagcaggtcaac
cagcgcctggaacagctgggccatcaacgcgatgagctggctgagcaacaagatcgccaa
caggcgatcgagaaggaacagactcaccagcaacatcgccagcaacaactcgacgccctg
ctccagcaggtcaacgagctggcgagccaacagcaaacggcccaggcaaaactcagcgcg
ttactgggcgagcactccagcgccgaacactggcagcagcagctggaacaggccgtgacc
cagtcacgtcaaagcgaaaccgacgcaaacaaacagctgcaagagatccacaatgcactg
atcgaactggccgccgacctcaaggcccagcaggaacgcgaacacgcgttgcaggccgaa
caccatgccctcgccacgcgcatcagcgaatggcgtgccctgcacccggaactcgatgac
gcagggcttagccatttgctggcctacgatgacgcccaggtcagccaattgcgccaacag
ttgcagctcagcgaaaaagccgtcgaacaggccaaggtgctgctgcaagaacgcgaacag
cgcctcgccgaccaccaggccctgcacaatggcaatcttgaggcccaagccttggacagc
gccctggcaacgctcaaccagcaattggccgaaggcgagaaaatctgcgccgaactgcgc
gcacggcagtccgaagaccagcgccgccaggaggccaaccaggccttcgccgagcacatc
gccaaagcctatgacgagtggcaacgctgggcacgcctgaacgcgctgatcggctcggcc
accggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgttggtgcaccac
gccaacgtgcaactgcgtcagttggtgcggcgttaccgcctcaagcgtggcggcagcatg
cttggcctgttggtgatggacacggaaatgggcgatgaattgcgctcggtgcattcgttg
tccggcggcgaaaccttcctggtgtccctggcgctggccttgggcctggcgtcgatggct
tccagcacgttgaagatcgagtcactgtttatcgatgagggcttcggcagcctcgacccg
gaatcgttgcaattggcgatggatgcgctggatggcttgcaggctcaaggccgtaaggtt
gcggtgatctcccacgtacaggaaatgcacgaacgcattcctgtgcagattcaggtcaag
cgccagggcaatggcttgagcaccctggaggtcaaatga
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integrated database retrieval system
