Pseudomonas simiae PCL1751: PF1751_v1c29740
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Entry
PF1751_v1c29740 CDS
T03766
Symbol
tssM
Name
(GenBank) type VI secretion protein TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw02025
Biofilm formation - Pseudomonas aeruginosa
pfw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PF1751_v1c29740 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PF1751_v1c29740 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfw02044
]
PF1751_v1c29740 (tssM)
Secretion system [BR:
pfw02044
]
Type VI secretion system
Imp/Vas secretion system core components
PF1751_v1c29740 (tssM)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
AAA_16
AAA_29
Wzy_C_2
Motif
Other DBs
NCBI-ProteinID:
AJP52674
LinkDB
All DBs
Position
complement(3363422..3366757)
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AA seq
1111 aa
AA seq
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MNAFFKGVGTVLRKSWVYSLLLVLSCALLVWFFGPLLAVDDYRFWQSPTSRLLTISGLLL
LWGLAMVGMGARRTARLNQPEEHERHQRQALINEEIRQVRARFKEALQALKTSRRYGERS
ERWRDELPWYLLIGEQGSGKTSLLAASGLPSPFDHPDAAPLGATSWCDWYFAEDAVLVEA
AGRYLGQPDPSVDAAGWSTLLDLLKWRRRSRPLNGVVVTLSADTLSSSNEHDLERHARHV
RTRLQDIQQTLHVDVPVYLVLTQSDRLAGFAEFFDAQQGDGTVQVLGGDLSKDLAQVRDV
FENLLQRLGGDLIPRLHQERNVERRGHMLDFPRQVARIGDALCLFIEAAFSVNRNQPINA
LRGFYLTCAKTVDVRPHFVQGLFKRVIFAEAGQAGLLTPERQRIHRRHGWMALAATVVIG
TVGAVWAHSYSFNHQRLLQLTGLIHTQRGTPPGADDSHALLTLLDSRLAATQVFSPQAQA
RWIDRAGLYQGALSIAPLAAAYEHTLQQRFLPYVATVLEGRVRGSLGDREQLLDSLRAYL
MLNLRERRDNAWLAEYVSGQWSGDSSANKRLNEHFARLLEQPFLAPLDEALVARARLVLR
GESLAEVVYRALREQARNLEPYPLAEGPAFSRVAPPIPGFYTKKYLQLFEQQGTQMVHAI
AQDNWVLGEGGDLSAADLRRLMLALEQRYFSEYADAWSDALGRIRLRESGSLQQGAEYLA
SLTSAQSALVQLLQQVRENTRLVSVSDRLETAVQPVAGLGAVTSRSLARAGLPDNARRAL
QRRFEPLHQLLDEQQNPGGELTQALRLLDELQLQLSAVSRDSSPEQAAFKMARQRMDGQQ
PLLGNLRDTAARFPQPLKGWFEGIADQSWRQLLDDAYGFVNQHYQNEVYGFYAKAIQRRY
PFDAHAGSDVALGDFQAFFKPRGAMARFYESYLRPFVIVEGNRYRLRGIEGRSLPMSRSL
LEQLTRAQIIRQGFFTEDQGELAVRFTLAPYSLDQAVSRATLRVGDQQLEYRHGPIVPVA
FHWPNEAENGRSSLVLERGAERPLGIEKDSGAWSLFRFFDLMQSEPASGRDAQVLKADLA
GLRANYLLTSQRDSSPFQMATWRTFRLPEQL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattcttcaaaggcgtgggtacggtgctacgcaaaagttgggtatatagcttg
ctgctggtgctgtcctgtgcgctgctggtgtggttcttcgggccgttgctggcggtggat
gactaccgtttctggcaaagcccgacgtcccgtttgctgaccatcagcgggttgctgttg
ctgtgggggctggcgatggtcgggatgggcgcgcgtcgtaccgctcggttgaatcagcct
gaagagcatgagcgccatcagcggcaggcattgatcaacgaggaaatacgacaggtacgg
gcgcgcttcaaggaggcgctgcaggcgttgaaaacctcacgacgctacggtgagcgcagt
gagcgttggcgagacgagttgccttggtatctgttgattggcgagcaaggcagtggaaag
accagcctgctggcggccagcggcttgccgtccccattcgaccaccccgacgcggcgccc
ctgggggctacgtcttggtgtgactggtattttgccgaagacgccgttctggtcgaggct
gcgggccgttacttgggccagccggacccttcagtggatgcagccggatggtcgacgctg
cttgatctgctcaagtggcggcgcaggtcgcggccactcaatggcgtagtcgtcacgttg
tcggccgacacactttcaagcagcaacgagcacgacctggagcgtcatgcccgccatgtg
cgtacgcgcttgcaggacatccaacagacactgcacgtggatgtgccggtgtatctggta
ttgacccagtctgaccggttggccggttttgccgagttttttgatgctcagcagggtgat
ggcacagtacaggtcctgggaggggacctgagtaaggacctcgcccaagtgagagacgtg
ttcgagaacctgttgcagcgcctgggtggagacctgattccgcgcttgcatcaagagcga
aatgtcgagcgccgagggcacatgcttgattttccccggcaggtcgcacgcatcggtgac
gccctgtgcctgtttatcgaggcggcgttttctgtcaaccgcaatcagccgatcaatgcc
ctgcgaggtttctacctgacctgtgcgaagaccgtcgatgtacgtccgcattttgtccag
gggttgtttaaacgcgtgatatttgccgaggccggccaggccggactgctgaccccggag
cggcagcgcatacatcggcgccacggatggatggcgctggcagcgactgtggtcatcggg
acagtgggggcggtgtgggcgcacagttactcgttcaaccatcagcgcctattgcaactg
acgggactgatccacacccagcgcggcaccccgccaggggcggacgatagccatgcgttg
ctgacgctgctggacagtcgcctggcggcaacccaagtgttttcgccacaggcgcaagct
cggtggatcgatcgggccggcttgtatcagggcgcgctgagtattgcaccgctggccgca
gcctatgagcacaccttgcagcagcggtttctgccatacgtggccaccgtgctcgaagga
cgcgtgcgaggcagcctgggtgaccgcgaacaactgctggatagcctgcgtgcctacctg
atgctcaacctgcgtgagcggcgtgataacgcctggctggcagagtatgtgtctggccaa
tggtcgggcgactcctcggcgaacaagcgcctgaatgagcactttgctcggctcctcgaa
caaccgtttctggcgccgttggatgaagcgctggtcgcccgggcgcgcctggtattacgc
ggggagtcactggcggaggtggtctaccgggcgctgcgggaacaagcgcggaacctggag
ccttacccgctggccgaaggcccggcgttttccagggttgcaccgcccataccggggttt
tacaccaagaaatacctgcagttattcgaacagcagggcactcagatggtccatgccatt
gctcaggacaattgggtccttggagagggcggcgatctcagcgcagcagatttgcgcagg
ctgatgctggcgctggagcagcgctatttcagtgagtacgccgacgcctggagcgacgcc
ctcggtcgaatcagattgcgcgaaagtggcagcctgcaacaaggcgctgaatatctcgca
agcctcacatcggctcaatcggccttggtgcagctgttgcagcaggtgcgcgaaaacaca
cggttagtgtcggtctccgatcgacttgaaacggcagtccagccagtcgccgggctgggc
gcggtgacgtccaggagcctggcccgcgcgggtctaccggataatgcccggcgtgccttg
caacgccgcttcgagcccttgcaccaattgctcgacgaacagcagaacccagggggcgag
ttgacgcaggcattgcgcttgctggatgagctgcagttgcaattgtcggcagtgagccgg
gacagttcaccggagcaggcagcgttcaaaatggccaggcaacgcatggatggacagcag
cccctgctgggcaacctgcgtgatacggcggctcgcttcccgcagccgctcaaagggtgg
ttcgaaggtattgccgaccaaagctggcgccaactgctcgatgacgcctacgggtttgtg
aatcagcactatcaaaacgaagtctatggcttctatgcgaaagccattcagcgccgctac
ccattcgatgcgcatgctggcagcgacgttgccctgggcgatttccaggcgtttttcaag
cctcggggtgccatggcacgcttttatgagagttacctgcggccgttcgtcatcgttgag
ggcaaccgctatcgcctgcgggggatagaagggcgcagcctgccgatgtcgcgctcgtta
ctggaacaactgaccagggcgcagatcattcgccaaggttttttcaccgaggatcagggg
gagttggccgtacggttcacgctggcgccctatagcctggaccaggccgtcagccgggcg
acgctacgggtgggtgatcagcagttggagtaccgccacggcccgatcgtgccggtggcg
ttccattggccaaacgaggcggagaatggtcgcagcagcctggtgctggagcgtggtgcc
gagcggccattgggcattgagaaagacagtggcgcctggtcgttgttccggtttttcgac
ctgatgcaaagcgagcccgcgagcggcagggatgcgcaggttctcaaggctgacctggcc
ggcctgcgggccaattacctgctcaccagtcaacgtgactcgagcccattccagatggcg
acatggcgcaccttccgcctgccggagcaactgtga
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