Pseudomonas simiae PCL1751: PF1751_v1c29810
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Entry
PF1751_v1c29810 CDS
T03766
Symbol
clpV
Name
(GenBank) type VI secretion ATPase ClpV
KO
K11907
type VI secretion system protein VasG
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw02025
Biofilm formation - Pseudomonas aeruginosa
pfw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PF1751_v1c29810 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PF1751_v1c29810 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfw02044
]
PF1751_v1c29810 (clpV)
Secretion system [BR:
pfw02044
]
Type VI secretion system
Imp/Vas secretion system core components
PF1751_v1c29810 (clpV)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_16
AAA_22
ClpB_D2-small
NBD_SMAX1
Clp_N
AAA_7
AAA_25
IstB_IS21
TniB
nSTAND3
NACHT
Sigma54_activat
Hpr_kinase_C
ECR1_N
T2SSE
TFIIB_C_1
Motif
Other DBs
NCBI-ProteinID:
AJP52681
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Position
complement(3372351..3374783)
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AA seq
810 aa
AA seq
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MMNVDLQQLIQTLTAQARRDLVRAAERCVTRGGREVLVEDLLLALLEHQDGLLVRAMADA
GIEAGELQATLQPKGEASASRNPVFALALVQWLQQALMVAHVELRQAEVDHGALLLALLR
HPLQYAGSAYQVLLSRLDVQRVHGFVLGQAPCPGPAPTVDSLLERFTHDLTRQAREGRID
PVLCRDAEIGQLIDILMRRRKNNPILVGEAGVGKTAVVEGLALRVVTAQVPEPLRDVRVL
TLDMGLLQAGASIKGEFERRLKGVIDEVNASMKPVILFIDEAHTLVGVGAQAGASDAANL
LKPALARGELRTIAATTWSEYKKYFEKDPALARRFQSVLVGEPSVEQAVSILRGLVSVYE
RSHGVYVRDDAVVAAAQMSARYLSGRQLPDKAVDVLDTACARLRTRRDTAPEALQRFYAE
QAEGVRQHQAISRDRQEGLPVDEQVLHGLNLRMETMESERQHLEQCWLEQPTSTQQVCPR
LVAEVISGWTGIPVEQLAFEHSARVLGLADALRARILGQEHAVQALDRNLRAVAAGLNKV
DAPVGVFLLVGPSGVGKTETALALGDLLYGGERFVTTLNMSEFQEKHSLSRLIGAPPGYV
GFGEGGVLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQIFDKGVANDGEGREIDFRNTLI
LMTSNLGSECIGELCAGGQRPEMHVLQEAIRPLLRDHFKPALLARIRVVPYYPVTGEILN
DLTRLKLERLGQRLSLRKLAFSYTPGLVAHMAEHCSHGDSGARFIDQWIELHLLPQVVDR
LLRAMAQDEPLTHVHAYLAGNGMPICEFSQ
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgtggatctgcaacaacttatccagacattgaccgcccaggctcgccgggat
ttggtgcgcgctgctgaacgctgcgtgacacgcgggggcagggaagtgttggtggaggac
ctgctgctggcgctgctggagcatcaagacggccttctggtacgggcaatggcggatgcg
ggcattgaggccggcgagctgcaagccacactgcaaccgaagggggaggccagtgcttcg
cgcaatccagtgtttgccctggcgcttgtgcaatggctgcaacaggccctgatggttgcc
catgtggaactgcgccaggctgaggtcgatcacggcgccctgctgttggcactgctgcgt
cacccgctgcagtacgcggggagtgcctatcaagtgttattgagccggttggacgtgcaa
cgggtgcatggtttcgtgctgggccaggcgccttgcccaggtcctgcgccgacggttgat
tcattgctggagcgctttactcacgacctgacacggcaggcccgtgaaggacgtatcgat
ccggtgttgtgcagggatgctgaaattggccagttgatcgacatcctgatgcgccggcgc
aagaacaacccaatacttgtcggagaagccggggtcggcaagacggccgttgtcgaaggc
ctcgcgttgcgcgttgtcactgcgcaggtgccggaacctctccgggatgtgcgggtgcta
accctggacatggggctgctacaggccggcgcgagcatcaagggggaattcgaacggcgc
ctcaagggcgtgattgacgaggtcaacgcctcgatgaaaccggtgatcctgtttatcgac
gaggcgcatacgctggtcggggtgggcgcccaggcgggcgcgtccgacgccgctaatctg
ctcaagccagccctggcccgtggcgaactgcgcaccatcgccgccaccacctggtcggaa
tacaagaaatacttcgaaaaagaccccgcactggcgcggcgcttccagtctgtattggtt
ggcgagcctagcgtcgagcaagcggtttcgatcctgcgtggactggtttcggtgtatgag
cgcagccatggcgtttacgtacgggacgacgcggtggtagcggcggcgcagatgagcgcg
cgttatctgtccgggcgtcagttgccggacaaggcagtggatgtattggacaccgcctgc
gctcgcttgcgtacccgtcgggacacggcgccggaggcattgcaacgcttctacgcggaa
caggcagaaggtgtgcggcagcatcaggcaataagtcgtgacaggcaggaagggcttccc
gtggatgagcaggtgttgcacgggcttaacctgcgcatggagacgatggaaagtgaacgt
cagcacttggagcagtgttggctggaacagccaacatcgacgcagcaggtgtgcccgcgc
ctggtggccgaagtcatcagtggctggaccggtatcccggttgaacaactggcattcgaa
cacagtgcacgggtgctgggcctagccgatgcgctgcgcgcgcgcattcttggccaggaa
cacgcggtgcaagccctggaccgcaacctgcgcgccgttgccgccgggctcaataaggtc
gatgcgccggtcggagtattcctgctggtcggcccaagtggcgtcggcaagaccgagact
gcgttggccctgggtgatctgttatatggcggtgagcgttttgttaccaccctcaacatg
tccgaatttcaggaaaaacactcgctgtctcgcttgattggggcgccgcccggttatgtc
ggtttcggcgagggcggtgtgctgaccgaagccgtacgccaacgcccatattcggtggtg
ctgctcgatgaagtcgagaaagccgacccggaagtgttgaacctgttctatcagattttc
gacaagggcgtggccaatgatggggaaggccgggaaatcgattttcgcaacacgctgatc
ctgatgacttccaacctgggcagcgagtgcatcggtgagctgtgcgcaggtggccagcga
cctgagatgcacgtgctgcaagaggcaatccgtcctctgctgcgtgaccacttcaaaccc
gcgttattggcccgaatacgtgtggtgccgtattacccggtgacgggtgagattctgaat
gatttgaccaggcttaagttggagcgcctggggcagaggttaagtctgcgcaagctggcg
ttcagctatacgccaggcctggttgcacacatggccgagcattgctcccacggagacagt
ggcgctcgttttattgaccagtggatcgagctgcatttgttaccgcaggtggtggaccgc
ttgctgcgggcgatggctcaagatgaacccttgacgcatgtgcatgcgtacctggcgggg
aatggcatgcccatctgtgagttcagccaatga
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