Pseudomonas simiae PCL1751: PF1751_v1c29940
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Entry
PF1751_v1c29940 CDS
T03766
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw00300
Lysine biosynthesis
pfw00470
D-Amino acid metabolism
pfw01100
Metabolic pathways
pfw01110
Biosynthesis of secondary metabolites
pfw01120
Microbial metabolism in diverse environments
pfw01230
Biosynthesis of amino acids
Module
pfw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PF1751_v1c29940 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PF1751_v1c29940 (dapF)
Enzymes [BR:
pfw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PF1751_v1c29940 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AJP52694
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All DBs
Position
complement(3387426..3388229)
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AA seq
267 aa
AA seq
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MPLPFVKMHAHGDDFIIIDRRGLHDPITAKVARQLGNRHTGIGFNQLAVLLDCDDAAARI
KFWNPNGTPLATCGSATRGVADRLMHEAGTDSVVLRTDRGLLTCVRAAGRQISVNMGEPS
LDWSAVPLAEAMDTLTLPIDGNPAACSMGNPHCTFFVEDLTAVDVATVGPALEIHPLFPA
KTNVHFVQVLDRGHIRLRIWERGGGVPLGSGSCCCGAVVNGIRRGLLDATVQVHCDGGTV
TVHWEGEGAVVLTGSVEPVMQGSAYVG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgccgtttgtgaaaatgcacgcccatggcgatgatttcatcatcatcgatcgc
cggggcctgcacgatccgattaccgcgaaagttgcccgccaactcggtaaccgccacacc
ggtatcggtttcaaccaactggccgtgctgctcgattgtgatgacgccgccgcgcgcatc
aaattctggaaccccaacggtacgccgctggccacctgcggcagtgccacccgtggcgtg
gctgaccgtctgatgcatgaggcgggcacggattcggtggtgctgcgtaccgaccgcggc
ttgctgacctgtgtgcgggctgcggggcggcaaatttcggtgaacatgggtgagccgtcg
ctggactggtcggccgtgccgctggccgaggccatggatacgctcaccttgcccatcgat
ggcaacccggcggcgtgcagcatgggcaatccgcattgcacctttttcgtggaagacctc
acggctgtcgacgtggcgaccgtgggcccggcgctggaaattcacccattgttcccagcc
aagaccaatgtgcatttcgtgcaggtgctcgaccgtggccatatccgcctgcgcatctgg
gagcgcggcggtggcgtgccgctgggttccgggtcgtgctgctgtggcgcggtggtcaat
gggatccgccgtgggttgctggacgccacggtgcaggtgcactgcgacggcggcacggtg
actgtgcactgggagggcgagggcgcagtggtgctcacaggcagcgtggaaccggtaatg
cagggcagcgcctacgtaggctga
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