Pseudomonas simiae PCL1751: PF1751_v1c29960
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Entry
PF1751_v1c29960 CDS
T03766
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pfw
Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfw01002
]
PF1751_v1c29960
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfw01011
]
PF1751_v1c29960
Peptidases and inhibitors [BR:
pfw01002
]
Cysteine peptidases
Family C82
PF1751_v1c29960
Peptidoglycan biosynthesis and degradation proteins [BR:
pfw01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PF1751_v1c29960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AJP52696
LinkDB
All DBs
Position
complement(3388793..3390388)
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AA seq
531 aa
AA seq
DB search
MFKKHACYLSICLLVAPLVATAVALPVEPLPVTTPAPVDLAPVQQALAQLPSVCPDLARQ
VDAAAQLRLQAFYQQQGNMPLWSADDRRQALQSQLLMLADDGLDPTHYSLPVPDATANVL
CSDITSSQHYLQALQDLHYGRLQQSRFEPLWHAQPPTRDPNVEVLAFAAQGLQDMAQAFD
QARPSADLYRSLRNAYSTVRQQPLPHWDPVASGPLLRPGMEDPRVPELARRLISGGYLAN
APSGKQYRDELVKAVKAFQLSHSLQADGVIGAGTVAELNISPAVRREQLRINLERFRWLA
QDLEPEGVLVNVAAAQLSVYQSGIPVWQTRLQVGRAERQTPLLKSRITRLTLNPTWTIPP
TIMREDKLPAIRLNPEYLRQQNLQVLDAEGHPLTAEQVDWARPGNILLRQEAGPRNPLGK
IVMRFPNPYSVYLHDTPSQPLFTKGPRAFSSGCVRVEQPLLLRDLLVSPAERARTDELLA
TGLTHEFRLATPVPVLLSYWTVEVNREGGLVYAPDIYGRDLVLMKAMGSVL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaaacacgcatgttacttgagcatttgcctgctcgttgcaccattggtcgcg
acagccgtcgcgctgccggtcgagccgttgccggtgaccacgccggcgccggtcgatctg
gcacccgtgcaacaggcgttggcgcaactgcccagtgtctgcccggacctggctcggcag
gtcgacgccgccgcccagttgcgcctgcaagccttctaccagcagcaaggcaacatgccg
ctgtggtccgccgatgaccgtcgacaagccctgcaatctcagttgctgatgctcgccgat
gacggcttggaccctacccactatagcttgcctgtgccagatgccacggctaacgtgctg
tgcagcgatatcaccagcagccagcactacctgcaagccctgcaggatcttcattacggc
cgcctgcagcaatcgcgcttcgaaccgctgtggcacgctcaaccacccacccgcgacccc
aacgtcgaagtgctggcgtttgcggcccaaggtctgcaagacatggcccaggcgttcgac
caggcacggcccagtgccgatttgtatcgcagcctgcgcaacgcttattccaccgtgcgc
cagcaacccttaccgcattgggaccctgtggccagcggcccgctgctgcgtccgggcatg
gaagacccacgcgtgccggagctggcgcggcgcctgatcagtggcggctacctggccaac
gcgcccagcggcaagcagtaccgtgatgaactggtcaaggcggtcaaggcctttcagctc
agccattcgttgcaggccgacggggtgatcggcgccggcactgtggccgaattgaacatc
agcccggcggtgcgccgcgaacaactgcgcatcaacctcgaacgttttcgctggctggcc
caggacttggagcccgaaggcgtgttggtcaacgtcgctgccgcgcaactgagcgtgtac
cagagcggcatcccggtctggcaaacccgcttgcaagtcggtcgcgccgaacgtcagacg
ccgctgctcaaatcgcgcattacccggctgaccctcaaccccacctggaccatcccaccc
accatcatgcgcgaggacaaactcccggccatccgcctcaaccccgaatacctgcgccag
cagaacctgcaagtactggacgccgaaggccacccgctgactgccgaacaggtggactgg
gcccgacccggcaatatcctgctgcgtcaggaagccggtccgcgcaatccgctgggcaag
atcgtgatgcgttttcccaacccgtactcggtgtacctgcatgacacgccgagccaaccg
ctgttcaccaagggaccgcgggcattcagctcagggtgcgtgcgggtcgagcaaccgttg
ttgctgcgggatttgttggtgagcccggctgagcgcgcccgtaccgatgagctgctggct
accggcctgacccatgagttcaggttggccacgccggtaccggtgctgttgagttattgg
acggttgaggtcaatcgcgagggcgggttggtgtatgcgccggatatctatgggcgggac
ctggtgttgatgaaggcgatggggagcgtgctttga
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