Pseudomonas simiae PCL1751: PF1751_v1c30410
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Entry
PF1751_v1c30410 CDS
T03766
Name
(GenBank) Rhs family protein
Organism
pfw
Pseudomonas simiae PCL1751
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Scabin-like
RHS
TEN_YD-shell
Enterotoxin_a
Pertussis_S1
DUF7586
NarE
Motif
Other DBs
NCBI-ProteinID:
AJP52741
LinkDB
All DBs
Position
3436811..3441583
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AA seq
1590 aa
AA seq
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MIEVTSQTIGYLVLATLDSKTRDVESVISDFKRCLNHYDAWAESFFSFSALDIEQVFKVG
DEVALVASINRSLLPSTTTATCQANGTLTLVHMFQSSRFVPIGNTPVMVQRIDPTGGPLG
EPLHKTIGPSGILEITECDRNQQYRVSFYPNVSTAHFKALYASYQSVIAPLEGWLRAEWT
TTFEPLWKGYSEANFLERYLSLHQAYARGFGEALYALWDNIKQMFQWLSDPMGYAEKLLH
YLSQDEFEKLLKLGTESIAKGLLVLSDEPLLFIYVSAMVSWMRMLPPPYMNELLGEISAE
VLINLLLCLATAGMGMAVRLSTKVLGGIKSQRARKWLEHMAGQFGKFRGDDHAELAKPIL
LSSRATRIKTIPDVPLKAGDQVVANPVPVVRDKAQRTVLVRQETVDDVPASARNPAGNVA
ASSDKTATNGCPVSMVTGEELLTLTDGTLDGLLPFEWTRLYRTSAVEMDCGLGFGWSHSL
AHRLSVSGDSVVWTDHENRSTPLPLPTASRPAITNSLAEAAIYLGAVPDELVLSQGSRFY
HFRDGVLTAISDAYDNRLRISRNYLGQIERLDNGVGRSLFLRYASGRIVAVDYQIERAVD
DGPFVWVTEQNVVSYAYDAGGRLVCATNAVGESEVYRYDDQHVILERGLAGGASFFWAWE
RSGKAARCVRHWASFSQMDTRYAWDDNGQVTVFNADGSQEVYVHDPRARLVQRVDPDGAQ
HFKSYDDKGRLTVEQDPLGAITAYQYDEAGRLVALFPGDDEPTTYEHDNGFVRVVRRGQA
VWKYERNNQGDVTRKTDPDGNATDYSYNKYGQLVGVWYPDHSCHRLVWNERGQLLEEQLP
NGGVKRYRYDDLGRQVAREDEHGALTQYQWDAAGRLLKLTQPGGATREYSYNAYGKITSE
RDELGHLTRYEYADGLHLISRRINADGTQVKYRYDNVRLLLTEIENEVGETYRLQYHANG
LIQQETGFDGQRTAYVYDLNGNLQEKTEHGDDGSQLVTRYERDHAGRLVRKTLPDGNQVD
YAYDRQGNLLSVENGHWALAYEYDSQNRLTAEHQGWGTLRYGYDACGQLQNLRLPDNNRL
TFNHDKGGHLATIELNGESLTSHLFKAGQELQRQQGQLISHYHYDDQQRLHAHAVTQQQH
TLYQRHYDYDKAGNLTRLLDTRKGEHHYHYDPLNRLTRADQERFGHDPASNLLMQDRPGP
DIVAGNRLMIQGDHHYDYDAFGNLIRERRGKGHQLVTEYRYDCQHRLIGIKKPNGQTASY
RYDPFGRRISKTVDGITTEFFWQGDTLIAEHHADRHRSYLYEPNTFRPLVLLEGFGPKET
ETFHYQLDHLGTPRELTASDGKIVWSAHYRAYGEITRLDIGKVDNPLRFQGQYFDEESGL
HYNRHRYYNPDNGRYLTPDPVKLAGGINAYQYVTNPTGWVDPLGLSTCPGGDGCKPHTNS
ENLNKQLNVDDGTPSLPASSKKQEYLYRGDSRHPDEIFETGFESRGKSTDLYLHSQNNAS
PPSNFVSTSISREQGLTFATSFGFEEGYLYTLKKIPGRDVNKELGILSDYKKEREIAIPN
RIDTKDILGATPVHDDGTHKGYSLINPNRK
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagtgaccagccaaaccatcggctatttggtactggccaccctggattcaaag
acgcgagacgttgaatcggtcatcagcgacttcaagcgctgcctcaatcactacgatgcc
tgggcggaaagctttttcagcttttcggcgctggatatcgagcaggtcttcaaggtcggg
gatgaagtggcgctggtcgcgtcgatcaaccgctccctgcttcccagcaccaccaccgca
acctgccaggccaacggcacgttgaccctggtgcacatgttccagagttcacggttcgtg
cccattggcaatacgcccgtgatggtgcaacgcatcgatccaacgggtggcccgctcggg
gagcccctccataaaaccattggcccgagcggcattctcgaaatcactgaatgtgatcgc
aaccagcagtaccgggtcagtttctaccccaacgtttccacagcgcatttcaaggcgctg
tacgcctcttaccagtcggttatcgcgccgctggaaggttggctgcgcgctgaatggacc
accacgtttgaaccgctgtggaaggggtattccgaagccaacttcctcgaacgctatctc
tcgctgcaccaagcctacgctcgggggtttggtgaggcgttgtatgcgctctgggacaac
atcaagcagatgtttcagtggctttcggacccaatgggttacgcggaaaaactcctgcat
tacctgtcccaggatgaatttgaaaagctgttgaagctcggcaccgaaagcatcgcaaag
ggcttgttggtgctgagcgatgagccgctgctgttcatttatgtgtcggcgatggtcagc
tggatgcggatgttgccgccgccttatatgaacgagttgctgggggaaatcagcgctgaa
gtattgatcaatttgctgctgtgtcttgctaccgcaggaatggggatggcggtgcgcttg
agtacgaaggtgctgggcggcatcaagtctcagcgagcgcgtaagtggttggagcatatg
gctgggcagttcgggaagttccgtggggatgaccacgcggagctggctaagccgatattg
ctcagtagccgggcaacgaggatcaagacgattccggatgtgccgttgaaggctggagat
caggtggttgccaacccggtgccggtggttcgggataaggcccaacgaacggtgttggtg
cggcaggagactgtcgacgatgtgcctgcttctgctcgaaacccggctgggaatgtcgct
gcgtcttcggacaagaccgccaccaacgggtgcccggtgtccatggtcacgggcgaggaa
ctgctgaccctcaccgatggaacgctggacgggctcttgccgtttgagtggacccgcttg
taccgcaccagtgcggtggaaatggactgcgggttggggtttggctggagtcactcgctg
gcgcatcggctgagtgtttccggcgactcggtggtgtggaccgatcatgaaaatcgctcg
acgcccctgcccttgccgaccgcttctcggcccgcgatcaccaacagcctggccgaagcg
gcgatctacctgggggctgtgcccgatgagttagtcctgtctcaaggatcacgtttctac
cacttccgcgacggtgtgctgacagcgatcagcgatgcgtatgacaaccggctgcgcatt
tcccgtaactacctggggcagattgagcggttggataacggcgtcgggcgctcgttgttt
ttgcgctatgcgtcgggccgcattgtggcggtggactaccagattgagcgggctgtggat
gacggcccatttgtctgggtgacggagcagaacgttgtttcctacgcctatgacgctggt
ggacgactggtttgtgcgaccaacgctgtaggcgaaagcgaggtttatcggtacgacgat
cagcacgtgattcttgagcgtggcttggccggtggggcgagtttcttttgggcgtgggaa
cggtctggcaaggctgcacggtgcgtacggcactgggccagtttctcgcagatggacacg
cggtacgcctgggatgacaacgggcaggtcacggtgtttaacgccgacggaagccaggaa
gtctacgtgcatgacccgcgggcgcggctggtgcagcgcgtggaccctgacggtgcccaa
cactttaaatcctacgatgacaaaggccgactgacggttgagcaggatccgctgggagcg
atcacggcgtatcagtacgacgaagccgggcgtttggtggcgctgtttccgggggacgat
gagccgacgacctacgagcatgacaatggattcgtacgggttgtaaggcggggtcaggcg
gtctggaaatatgagcgtaataaccagggtgacgtgacacgcaaaaccgatcctgacggc
aacgctactgactacagctacaacaaatatgggcagctggttggtgtctggtacccggat
cacagctgtcatcggctggtgtggaatgagcgtgggcagttgcttgaggagcagttgccg
aacggtggcgttaagcgctatcgctatgacgaccttgggcggcaagttgcgcgtgaagat
gagcatggggcgctgacccagtatcaatgggatgcagcaggccgcttactgaaactgact
cagcccggcggtgccacacgggaatacagctacaacgcttacggaaaaatcacctccgaa
cgcgatgaactgggccacctcacccgctacgaatacgccgacggcctgcacctgatcagc
cgtcgcatcaacgctgacggcacccaggtcaaataccggtacgacaacgttaggttattg
ctgaccgagatcgaaaacgaggtgggcgaaacctaccgactccagtatcacgccaatggc
ctgatccaacaggaaacaggatttgacggccagcgcaccgcttacgtctatgacctcaac
ggcaacctgcaggagaagaccgaacacggcgatgacggcagtcagctggttacccgttac
gagcgtgaccatgccggtcgactcgtaagaaaaaccttgcccgacggcaaccaagtcgat
tacgcctacgaccgccaaggcaacctcttaagcgtcgaaaacggccactgggcgttggcc
tacgagtacgacagccaaaaccgcctcaccgccgaacaccaaggctggggcacgctgcgc
tatggctacgacgcctgcggccaactgcaaaacctgcgcctgccggacaacaaccgtctc
accttcaaccacgacaaaggcggccacctcgcgaccatcgaactgaacggtgaaagcctt
acctctcatctattcaaagccggccaggaactccaacgccaacaaggccaactgatcagc
cactaccactatgacgaccagcaacgcctgcacgcccacgccgtcacccagcaacaacac
accctttaccagcgccactacgactacgacaaggccggcaatctcacccgcctcctcgac
acccgcaaaggcgagcatcactaccactacgacccgctaaaccgcctcacccgcgccgac
caggaacgcttcggccatgaccccgccagcaacctgctgatgcaagaccgccccggcccg
gacatcgtggcgggtaaccgcctgatgatccaaggcgaccaccactacgactacgacgct
ttcggcaaccttatccgcgaacgacgcggcaaaggccatcaactcgtcaccgaataccgc
tacgactgccagcaccgtctgatcggcattaaaaaacccaatggccagaccgccagctac
cgctatgacccgtttgggcggcgcatcagcaaaaccgttgacggcatcactacagagttt
ttctggcagggcgacacactgatcgccgagcaccacgcggatcgccaccgcagttacctc
tacgagccgaacacctttcgcccgctggtcctactggaaggtttcggtccaaaggaaacc
gagaccttccactaccaactcgaccacctgggtacgccgcgggaactcaccgcctccgat
ggcaaaatcgtctggtccgcgcactaccgcgcttacggtgaaatcacccgcctcgacatc
ggaaaagtcgacaacccgctgcgtttccagggccaatacttcgatgaagaaagcgggctg
cactacaaccgccatcgctactacaatccggataatggccgttacctgaccccggacccg
gtgaagctggcgggtgggatcaatgcgtaccagtacgtgaccaaccctacgggctgggtt
gatccactgggtttgagcacgtgtcccggcggggacggatgcaaaccacacacaaactca
gaaaacttaaataaacagctgaacgtagacgacggcactccttcgctaccagcatcaagt
aaaaaacaagaatatttatatcgaggggactcaaggcacccggacgaaatttttgaaaca
ggctttgagagcagaggaaaaagcactgacctatacttacactcgcaaaacaatgcgagt
ccaccaagcaattttgtgagcacatcgatatcaagggagcaagggttgacgttcgcaaca
tcctttgggtttgaggaaggctatctttacaccctaaagaaaatcccgggtcgggatgtc
aacaaagaactaggcattttatccgactataaaaaggagcgcgaaattgccataccaaac
cggatagataccaaggatattctaggagccacacccgtccacgatgatggaacgcataaa
ggctactcactcattaatccaaatagaaaatga
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integrated database retrieval system
