Pseudomonas simiae PCL1751: PF1751_v1c31000
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Entry
PF1751_v1c31000 CDS
T03766
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PF1751_v1c31000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfw03021
]
PF1751_v1c31000
Transcription machinery [BR:
pfw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PF1751_v1c31000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
GerE
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AJP52800
LinkDB
All DBs
Position
3496867..3497379
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AA seq
170 aa
AA seq
DB search
MSTSFTHLYGTHHGWLLGLLRRRLNDRWDAADLAHDTFIRILSRPPAETDPVRQRSYLAT
IARGLCIDHWRRRQLERTWLQTLAERPEALQPSPEQRAIIVETLVEVDAMLARLPKKVSE
AFLLAQLHGLPYKQIAEQLGVGERMVKKYMAQALLHCAILEAELDGMLVQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacttcttttacccacctctacggcacccatcacggttggctgctcggcctgctg
cgccggcgcctgaacgaccgctgggatgccgccgacctggctcacgacacgtttatccgg
attctcagccgcccaccggccgagaccgaccccgtccgccaacgctcctacctggccacc
atcgcccgtggactgtgcatcgaccattggcgccggcgccagctcgaacgcacgtggctg
caaacgctggccgaacggccggaagcgctgcaaccgtcgccggagcaacgggcgatcatc
gtcgagacactggttgaggtggacgccatgctcgcgcgactgccgaagaaagtcagcgaa
gccttcctgctcgcccagttacacggcctgccctacaagcagatcgccgagcagcttggc
gtgggcgagcgcatggtcaagaagtacatggcccaggccctgctgcattgcgcaatcctg
gaagccgaactcgacgggatgctcgtgcaatga
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