Pseudomonas simiae PCL1751: PF1751_v1c31720
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Entry
PF1751_v1c31720 CDS
T03766
Name
(GenBank) sigma-54 dependent transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfw
Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfw03000
]
PF1751_v1c31720
Transcription factors [BR:
pfw03000
]
Prokaryotic type
Helix-turn-helix
Other families
PF1751_v1c31720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
AAA_5
nSTAND6
AAA_2
HTH_7
HTH_23
AAA_3
AAA
HTH_28
Mg_chelatase
AAA_7
HTH_22
HTH_20
HTH_10
AAA_16
PAS
HTH_Tnp_1
HTH_psq
DUF2089
nSTAND3
HTH_11
MCM
HTH_38
HTH_17
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AJP52872
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Position
3578085..3579902
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AA seq
605 aa
AA seq
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MAEPLAHDTLIQESWRRCRAFGLDHQSTPSFDQLPAEGISQLLESQHSLVQTTHQEVLPY
YENILSNSNCLIMLADNQGQVLTSWGTQRFIDPKLARGFNPGASWMERSSGTNAIGTALA
CAQAVHIEHDEHFLKANRFMTGSAAPIFDAQREIIAVLDVSSDSYLPPSHTLGMVKMMSQ
TVENRLILNLFRGEHFQLTFNTGLSNLDSQWAGLLIFDESGQVLSANRRADNLLGISLSR
VMIDSLFKVSLLELLNQPEGLPFSLQAAGRNRFQCVLRRPKQMPVQARVFTEPTPPTPAS
IGLKTLHFGDVRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSRSQKAFIA
VNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPLPTQARLL
RVLQERCVQPVGSSELFPVDLRIISATNRALRELVQAGRFREDLYYRIGGLTLELPPLRE
RTDKQALFQQLWQQHREPTQWAGLSAEVLALFEQHPWPGNLRQVSSVLQVALAMAEEQPI
RAEHLPDDFFVDLKVDPPLPASEYLDDSIDLNQRLKAAGGNISHLARELGVSRNTLYKRL
RQHEG
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccactggctcacgacacccttatccaggaatcctggcgccgctgccgcgcc
ttcggcctggaccaccagagcacgcccagcttcgaccagctccccgccgagggcatcagt
caactgctggaaagccagcactcgctggtacagaccacgcatcaggaagtgctgccctac
tacgaaaacatcctcagtaattccaactgcctgatcatgctggccgacaaccagggccag
gtgctgaccagctggggcacccagcgatttatcgaccccaagctggccagaggcttcaac
cccggcgccagctggatggagcgctccagcggcaccaatgccatcggcaccgcgctggcc
tgtgcccaagcggtgcatatcgagcacgatgaacacttcctcaaggccaaccgcttcatg
accggctcggcggcgccgattttcgatgcgcagcgcgagatcatcgcggtgctggatgtg
tccagcgacagctacctgccgccctcgcacaccctgggcatggtcaagatgatgagccag
accgtggaaaaccggctgatcctcaacctgtttcgcggcgagcacttccaactgaccttc
aacaccggcctgagcaacctcgacagccagtgggccggcctgctgatctttgatgaaagc
ggccaggtgctgtcagccaaccggcgtgccgacaacctgctgggcatcagcttgtcgcgg
gtgatgatcgacagtttgttcaaggtgtcattgctggagttgttgaaccagccggaagga
ttgcctttctccctgcaggccgcaggacgcaaccgcttccaatgcgtgttgagacgcccc
aagcagatgcccgtgcaggcgcgcgtgttcaccgagccgacgccaccgacgcctgcgtcg
attggcctcaagaccctgcacttcggcgatgtacgcgtggagaaggccgtgcgccaggct
gaacgcttactggaaaaggacattccgctgctgatccatggcgaaaccggcgtgggcaag
gaagtgttcgtcaaagccctgcaccaggccagttcgcgcagccagaaggcgtttatcgcg
gtgaactgtgcggcgattcccgccgagctggtggaatcggaactgttcggctatgaaaaa
ggcgccttcaccggcgccaatcagaaaggcagcatcggcctgatccgcaaggccgacaag
ggcacgctgtttctcgacgagatcggtgatatgcctctgccgacccaggcccgtttgctg
cgggtgctgcaggagcgctgtgtacagccggtgggcagcagcgagctgttcccggtagat
ctgcgaatcatctcggccaccaaccgtgcactgcgcgagctggtgcaggccggacgtttt
cgtgaggatttgtactaccgcatcggcggcttgaccttggaactgccgccgttgcgcgaa
cgtaccgataagcaggcactgttccaacaactgtggcagcaacaccgcgagccgactcaa
tgggcaggcctcagcgccgaagtgctggcgttattcgaacagcacccgtggccggggaat
ctgcgtcaggtgagcagcgtgttgcaggtggcgctggccatggctgaggaacagccgatc
cgcgcggaacacctgccagatgatttttttgtggacttgaaggtagatccgccgctgccc
gccagtgaatacctggatgacagcatcgatctgaaccagcgtttgaaggcggcaggcggg
aacatctcccacctggcgcgggagctgggggtgagccgcaacaccttgtacaaacgcctg
cgccagcacgaaggctaa
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