Pseudomonas simiae PCL1751: PF1751_v1c33260
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Entry
PF1751_v1c33260 CDS
T03766
Symbol
liuD
Name
(GenBank) methylcrotonyl-CoA carboxylase, alpha-subunit LiuD
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw00280
Valine, leucine and isoleucine degradation
pfw01100
Metabolic pathways
Module
pfw_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PF1751_v1c33260 (liuD)
Enzymes [BR:
pfw01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
PF1751_v1c33260 (liuD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
BT_MCC_alpha
HlyD_3
HlyD_D23
GARS_A
ATP-grasp_3
ATPgrasp_ST
DUF3182
ATP-grasp_4
Peptidase_M6
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AJP53026
LinkDB
All DBs
Position
3739639..3741564
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AA seq
641 aa
AA seq
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MSTLTTLLVANRGEIACRVMRTAKAMGLTTVAVHSAIDRDARHSREADIRVDLGGSKATD
SYLQIDKLIAAAQDSGAQAIHPGYGFLSENAGFARAIEAAGLIFLGPPASAIDAMGSKSA
AKALMETAGVPLVPGYHGEAQDLETFRAACERIGYPVLLKATAGGGGKGMKVVEDVSQLA
EALASAQREALSSFGNGQMLVEKYLLKPRHVEIQVFADQHGHCLYLNERDCSIQRRHQKV
VEEAPAPGLSGEQRKAMGEAAVRAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVEHP
VTEAITGLDLVAWQIRVAQGEALPINQEQVPLTGHAIEVRLYAEDPTNDFLPATGRLALY
RESAPGPGRRVDSGVEQGDSVSPFYDPMLGKLIAWGEDREQARLRLLAMLDEFAIGGLKT
NLGFLRRIIGHPAFAAAELDTGFIPRYQEELLPAPGDLSDEFWQAAGSAFIQSLPPEDGP
WGDKRGFRAGLPAEVSLHLSCTGQDRLVTLAADAPPLRGEQLLIERQGVRRSHLAVRSEG
SVFLRWDGEMHGVTLFDPIAAVEANQSHQGGLTAPMNGSIVRVLVEVGQHVDAGTQLVVL
EAMKMEHSIRAPQAGVVKALFCQEGEMVAEGCALVELEPAG
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttgacaactctgctggtggccaaccgtggcgagattgcttgccgggtaatg
cgcaccgccaaggccatgggcctgaccaccgtggcggtgcacagcgccatcgaccgcgat
gcgcgccatagccgcgaagcggatatccgtgtcgacctgggcggcagcaaggccactgat
agctacctgcaaatcgacaaactgatcgccgcagcccaggacagcggcgcccaggcgatt
catccgggttacggctttttgtcggagaacgccggttttgcccgcgcgattgaagcggct
ggtttgatcttcctcggcccacccgcctcggccatcgacgccatgggcagcaaatcggcc
gccaaagcactgatggaaaccgccggcgtgcctctggtgccgggttaccacggcgaagcc
caagacctggaaaccttccgcgcagcctgcgagcgcatcggctaccccgtgctgctcaag
gccacggccggtggtggcggcaagggcatgaaggtggtggaggatgtcagccagttggcc
gaggccctggcctcggcacagcgcgaggcgctgtcgtccttcggcaacgggcagatgttg
gtggaaaagtacctgctcaagccacgtcacgtggagatacaggtgtttgccgatcagcac
gggcattgcctgtatctcaatgagcgagactgctcgatccagcgtcgccaccagaaggtc
gtcgaagaagccccggcaccgggattgagtggtgaacaacgcaaggccatgggcgaagcc
gccgtgcgtgcggcccaggccatcggctatgtcggcgcaggcaccgtggagttcttgctg
gacgcgcgtggcgaattcttctttatggagatgaacacgcggctgcaggtggagcacccg
gtgaccgaggcgatcaccggcctggacttggtggcctggcagatccgtgtcgcccagggc
gaggcgttgccgatcaatcaagagcaagtgccgctgacgggccatgcgatcgaagtgcgg
ctgtatgccgaagacccgaccaatgacttcctgcccgccaccggacgcctggcgctgtac
cgcgaatccgcaccggggccggggcgtcgtgtggacagcggtgtcgaacaaggcgacagc
gtgtcgccgttctacgatcccatgctcggcaaactgattgcctggggcgaagaccgtgag
caggcgcgattgcggttgctggccatgctggatgagtttgccatcggcggactcaagacc
aacctgggctttttgcggcgcattatcgggcatccagcgtttgcggcagccgaattggat
accgggtttattccgcgctatcaggaggagttgctgccggccccaggggacttgagtgat
gaattctggcaggcggccggatcggcattcatacagagtttgccgccggaagatgggcct
tggggggataagcgcggatttcgtgctgggttacctgccgaagtgtcgttgcacttgagc
tgcactggccaggatcgattggtgacgctggccgcggatgcgccgccattgcgcggcgag
cagctgctgatcgagcgacagggcgtacgtcgcagccacctggcagtgcgcagcgaaggc
agtgtgtttttgcgctgggacggcgagatgcacggcgtgacgctgttcgacccgattgcg
gccgttgaggccaaccagtcgcaccagggcggcctgacggcaccgatgaacggcagcatc
gtacgtgtgctggtggaggtgggccaacacgtcgacgccggcacgcaactggtggtgctg
gaggccatgaagatggagcacagcattcgcgcgccccaggctggagtggtcaaggcgttg
ttctgccaggaaggtgaaatggttgcagaaggttgcgcgctggtggaactcgaaccggcc
ggttag
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