Pseudomonas simiae PCL1751: PF1751_v1c39610
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Entry
PF1751_v1c39610 CDS
T03766
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PF1751_v1c39610 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfw03019
]
PF1751_v1c39610 (recQ)
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c39610 (recQ)
Enzymes [BR:
pfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PF1751_v1c39610 (recQ)
Messenger RNA biogenesis [BR:
pfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PF1751_v1c39610 (recQ)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PF1751_v1c39610 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
HTH_23
HTH_29
GerE
Motif
Other DBs
NCBI-ProteinID:
AJP53656
LinkDB
All DBs
Position
complement(4406850..4408976)
Genome browser
AA seq
708 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA
VVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQ
PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT
REEIVERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK
VDEVAAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV
AHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIYRTG
QRYGVGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIE
GFGGLRLNDSCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLVRGEEREQWEALRTLRR
KLAQEHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVLGGQAE
APKEVADIRHELISLARAGMTPVQIAGQLQCSEKNVYTLLAESIGKQQLSLEQALDLPED
LLGEIQDAFLDGEGELPPVAEIAPLFTGRVPEGVLYCVRAALQSEFEI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagcaggcacaacgcgtcctcaaggacatcttcggctacgacagttttcgtggc
cgccagggtgcgatcattgagcgcgtggccagcggcggtgacgccctggtcctgatgcct
accggcggcggcaagtcgttgtgcttccaggtgccggcgctgttgcgcaatggcctggcg
gtggtggtgtcgccgttgatcgcgttgatggacgaccaggtggcgacccttgaagagctc
ggtgtcgccgctgcttcgttgaactccaccctcagtgccgagcagcagcgcgacctggcg
gcgcgtatcaagcgcggtgaagtgaagatgctgtacctggcccccgagcgtctggtgcag
ccgcgcatgctggcttttttgcagagcctggaaatcgccctgttcgccatcgacgaagcc
cactgtgtgtcccaatggggtcatgactttcgccgtgagtatttgcaactgggtcaattg
gccgagctgtttcccgatgtgccgcgcattgccctgaccgccaccgccgacaagcgtacc
cgcgaagaaatcgtcgagcgcctgcacctgcagaacgccgagcgcttcctgtcgagcttt
gaccggccgaatattttctaccgcatcgtgcccaaggagcagccgcgcaagcagttgctg
gcgttcctctcggagcgacgcagcgatgcgggcatcgtctattgcctgtcgcgcaagaag
gtcgatgaagtcgccgcgtttctctgtgagcaaggctacccggcactgccgtatcacgcc
ggcctgccgaatgacctgcgtgcctaccaccagaagcgcttcctcaacgaggaaggcctg
atcatggtggccaccatcgcgttcggcatgggcatcgacaagtccaacgtgcgattcgtc
gcgcacatggacctgcccaaatcccttgaggcctactaccaggaaaccggccgtgccggc
cgtgatggtttgccggcggatgcgtggatggtctacggcctgcaggacgtggtgatgctc
aagcagatgctgcagaactccgagggcgacgagcgccacaagcgcctggagcaacacaag
ctcgacgcgatgctctcgctgtgtgaggagacccgctgccgccgccagaccttgctggcg
tatttcgatgaagacatgcccgaaccctgtggccattgcgacaactgtgtcgacggcgtg
cagacctgggatgccactgagccggcgcgccaaggcttgtccgctatctaccgcaccggt
cagcgttacggcgtcggtcacctggtggacgtgttgctgggcaaggacaacgagaaagtg
cgcagcttcggccacgaaaaactctcggtctacggcgtcggcaaggcccgcgccgaaggc
gagtggcgctcgttgttccggcagatggtggcgcgtggcctggtggacatcgatatcgag
gggtttggcggcctacgtctgaatgacagctgccggccgttgctcaagggcgaagtcagc
ctggagctgcgccgcgacctcaagccgcaaaccaccgccaagagcagcaccagccaggcc
agccagttggtgcgtggcgaagaacgcgaacagtgggaagccttgcgcaccctgcgacgc
aaactggcgcaggaacacagcgtgccgccgtacgttattttccccgactccaccttgctg
gagatgctgcgcgagcagcccaccagcatggccgagatggcgcgggtcagtggggtgggc
gcgcgcaagctggagcgttacggccaggccttcctcgaagtgctcggcggccaggccgag
gcgccaaaggaagtcgccgatatccgccacgaactgatcagcctggcacgcgccggtatg
accccggtccagatcgccggtcagttgcagtgctcggagaagaacgtctacaccttgctt
gccgaatccattggcaagcagcaactgtcgttggagcaggcccttgatttgccagaggat
ctgctcggtgaaatccaagacgcgttcttggacggagagggcgaattgccacctgtggcg
gagattgccccgctgtttaccgggcgtgttccggaaggtgttttgtactgcgtgcgggcg
gctttgcagtctgaattcgaaatttag
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