Pseudomonas simiae PCL1751: PF1751_v1c40020
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Entry
PF1751_v1c40020 CDS
T03766
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pfw
Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfw03009
]
PF1751_v1c40020 (rumA)
Enzymes [BR:
pfw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PF1751_v1c40020 (rumA)
Ribosome biogenesis [BR:
pfw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PF1751_v1c40020 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
MTS
PCMT
Methyltransf_11
RrnaAD
Methyltr_RsmB-F
Methyltransf_23
TRM5-TYW2_MTfase
Methyltransf_15
DREV
GMP_synt_C
Ubie_methyltran
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AJP53697
LinkDB
All DBs
Position
complement(4450656..4452008)
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AA seq
450 aa
AA seq
DB search
MAKHERGLRFQPTGGSRAPQIPVGKKQRLTIERLANDGRGIVFFEGRTWFVNGALAGEEV
EARVLGTHGKIVEARTERVFSASELRRPAPCAHFGRCGGCSVQHLPHGEQLALKQRMLAE
QLSRVAGVEPQEWAAPLSGPEFGYRRRARVAVRWDAKTKQLEVGFRAVASQDIVAIDECP
VLVQALQPIMQRLPNMLRRLSKPQALGHVELFSGTSVAVLLRHMAPLSEADLQVLKEFCA
FHEAQLWLHGEGQPEPVEADSVLGFRLSHWDLELAYRPGDFVQVNAGVNEAMVTQALEWL
APQPDERVLDLFCGLGNFALPLARQVREVVAVEGVQTMVERAAVNAVSNDLHNVQFFQAD
LSQPLTDAEWAKQGFSAVLLDPPRDGALEVVRKLATLGAKRLVYVSCNPATLARDTVELV
KQGYRLKRAGILDMFPQTAHVEAMALFEAG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcacgagagaggcctgcgcttccaaccgacgggcggcagccgcgccccgcag
atccctgtgggcaagaaacagcgcctgaccatcgagcgcctggccaacgacggccgaggc
atcgtgttctttgaaggtcgcacctggttcgtgaacggcgcgctggcgggcgaagaagtc
gaagcacgggtgctgggcacccatggcaagatcgtcgaggcgcgcaccgagcgggtgttc
agtgccagcgaattacgccgtccggcgccgtgcgcgcatttcggccgctgcggcggttgc
agcgtgcagcacttgccccacggcgaacaacttgccctgaaacagcgcatgcttgccgag
caactgtcccgcgtggcgggtgtcgaaccgcaggagtgggccgcgcccttgagcgggccg
gaattcggttaccgtcgccgcgcccgcgtggccgtgcgctgggacgccaagacgaaacag
ctggaagtgggtttccgcgcggtggctagtcaggacatcgtcgccatcgacgaatgcccg
gtgctggtacaggccttgcagccgatcatgcagcgcctgcccaacatgctgcgtcgcttg
agcaaacctcaggcgctggggcatgtggagttgttcagtggtacgtccgtggccgtgttg
ctgcgccatatggcgccgctgtcggaagcggacctgcaggtgctgaaagaattctgtgcc
ttccatgaagcccaattgtggctgcatggcgagggccagccggaaccggttgaggccgat
tcggtgctcgggtttcgcctgagtcactgggatctggagctggcttaccggcccggagat
tttgtccaggtcaatgccggggtcaatgaagcgatggttacccaggccttggaatggctg
gcgccacaacccgatgaacgggtgctggacctgttttgcggcctgggcaacttcgccctc
ccactggcgcgccaggtgcgtgaagtggtggcggtggagggggtgcagaccatggtggag
cgggcggccgtcaacgccgtcagcaacgatttgcataatgtgcagttttttcaggctgat
ttgtcccagcctttgactgacgcggaatgggccaaacaaggcttttctgcggtactcttg
gacccaccccgtgatggtgccctggaggttgtgcgcaagctcgcgaccctgggagccaag
cgtctggtgtatgtgtcctgcaatccggccacgctggcgcgggacacggttgagttggtc
aagcaaggctaccggctaaaacgtgccgggatcctcgacatgtttccgcaaaccgcgcat
gtcgaggccatggcgttatttgaagcgggctag
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