Pseudomonas simiae PCL1751: PF1751_v1c44870
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Entry
PF1751_v1c44870 CDS
T03766
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03410
Base excision repair
pfw03430
Mismatch repair
pfw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PF1751_v1c44870 (recJ)
03430 Mismatch repair
PF1751_v1c44870 (recJ)
03440 Homologous recombination
PF1751_v1c44870 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c44870 (recJ)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PF1751_v1c44870 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PF1751_v1c44870 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PF1751_v1c44870 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AJP54182
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All DBs
Position
complement(4979030..4980739)
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AA seq
569 aa
AA seq
DB search
MRIDPRPLPAVLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVDLL
VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQRAPQLLITVDNGISSVEGVAAAKAAGLQVLVTDHHLPGDELPAADAIVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGWYDNTPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLTTDFAAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALAVVASQHPNLITKYGG
HAMAAGLTLPEENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDREVWPNPTVR
WVELAYKLDVNEFRGNETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgatcctcgcccgttgcccgccgtcctgccgtttctcggtgaattgccgcca
ctgctgacccgtctctacgccgcacgcggagtgcagtccgaagccgagctggacaaaagc
ctggcgcggttgatcccctaccagcagctcaagggcatcgacgcggcggtggacctgctg
gtgacggcgttagagcagcgccagcgcatccttatcgtcggcgactttgacgccgatggc
gccaccgccagcaccgtgggcaccctgggcttgcgtttgctcggtgcggcccatgtcgac
tacctggtgcccaaccgtttcgaatacggctacggcctcaccccggaaatcgtcgccgtg
gcgctgcagcgcgcgccgcagttgctgatcacggtggacaacggcatctccagcgtcgaa
ggcgtggcggcggcgaaggcggcggggttgcaggtgctggtgacggaccaccacttgccc
ggcgatgagttgccagcggcggatgccatcgtcaacccgaaccagcctggctgtgaattc
ccgagcaaagccttggccggcgtgggcgtgattttctatgtgctgatggcgctgcgtgcg
cgcctgcgcagcttgggctggtacgacaacacgccacaacccaacatcggtgaattgctc
gacctggttgccctgggcagcgtcgccgacgtagtgcccctggacgccaacaaccgcatc
ctggtgcatcaaggcctggagcgtatccgcgccggtcgcgcgcggccggggatcaaggcg
attttggaagtggccaagcgtgatgctgcgcgtatcacctccaccgacctgggttttatc
cttggcccgcgcttgaacgccgccgggcgcctggatgacatgagcctgggtatcgaatgc
ctgctcaccaccgacttcgccgcagcgcgggaaatggccgcgcaactggacggcatgaac
caggaccgcaagtcgatcgagcagggtatgcagcgcgaggccctggcccagctcaaggac
ttgccggtggagtccatgccttacggcttgtgcctgttcgatccggaatggcatcaaggc
gtgatcgggattctcgcgtcgcgtatgaaagaacgttacttccgcccgaccatcgccttc
gccgacgccggtgatggcttgctcaagggctcagggcgctctgtgcaggggtttcatatc
cgcgatgccctggcggtggtcgcgagtcagcatcccaacctgatcaccaaatacggcggc
cacgccatggcggcggggctgacgttgcctgaggaaaacttcccactctttgccgaagct
tttgatgctgaagtgcgtcgccaactgcgtgaagaagacctgaccggacgcttgttgtcc
gacggcaccctggcggtggaagagtttcatctggagctggcccgcgcgttgcggcatgcc
ggaccgtgggggcagcacttccccgagccgttgtttcacggcgtgtttcaactggtcgaa
cagcgcgtggtgggggagcggcacctgaaggtggtgctcaagagcgaatgcgggtccgta
aagctcgatggcattgcgtttggggtggaccgagaggtctggccgaatccgaccgtgcgg
tgggtggagttggcgtacaagctggatgtgaacgagtttcgtgggaatgaaaccgtgcaa
ctgatgattgcccacatcgaaccgcgctag
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