Pseudomonas simiae PCL1751: PF1751_v1c46430
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Entry
PF1751_v1c46430 CDS
T03766
Symbol
catR
Name
(GenBank) transcriptional activator CatR
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
pfw
Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfw03000
]
PF1751_v1c46430 (catR)
Transcription factors [BR:
pfw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PF1751_v1c46430 (catR)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AJP54337
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Position
5144546..5145421
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AA seq
291 aa
AA seq
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MELRHLRYFQVLGETLNFTRAAERLHIAQPPLSRQIQQLEDELGVILLERSRPLRLTEAG
RFFYEHATVLLEQLNKVCDNTRRIGQGEKTWLGIGFAPSTLYGVLPELIRRLRTHEALEL
ELGLSEMTTLQQVEALKAGRIDVGFGRIRIDDPAIVQRVLVEDRLVAVLPAGHPLLDAPA
TLAQLAAEPFVLYPGNPRPSYADHVIALFDAHGLSLKVAQWTNELQTAIGLVGAGIGVTL
VPASVQVLHRADIGYTPVVEATATSPIILSRRVNDQSPGLSHCLQLVEELI
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgtcacctgcgctatttccaggtgctgggggaaaccctcaacttcacccgc
gccgccgaacgcctgcacatcgcccagccgccattgagccggcagatccagcagttggag
gacgagttgggcgtgatcctgcttgaacgtagcagaccgctgcggctgaccgaggccggt
cggtttttctatgaacacgccactgtgctgctggaacaactgaacaaggtctgcgacaac
acgcgacgcatcggccagggtgaaaagacctggctgggcatcggttttgcaccgtcgacg
ctgtacggcgtgttgccggaactgattcggcggctgcgcacgcatgaggcactggagctg
gagttggggctgtcggaaatgaccaccttgcaacaggtcgaagcgctcaaggccgggcgg
attgatgtgggtttcgggcggatacgcatcgacgacccggccatcgtccagagggtgctg
gtggaggatcggctggtggctgtgttgcccgccggacaccccttgctggacgcgcccgcc
accctcgctcaactggccgccgagccctttgtgctctaccccggtaacccacggcccagc
tatgccgaccatgtaattgcgctgttcgatgcccacggtttgagcctcaaggtggcgcag
tggaccaacgagttgcaaaccgccatcggcctggtcggcgccgggatcggcgtgacgctg
gtgcctgcctcggtgcaggtgttgcaccgggcggacatcggctacacgccggtggtggag
gccaccgcgacctcgccgatcattctcagccggcgggtaaatgatcaatcgccggggctc
agtcattgcctgcaactggtggaagaactgatctga
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