Pseudomonas simiae PCL1751: PF1751_v1c46600
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Entry
PF1751_v1c46600 CDS
T03766
Name
(GenBank) diguanylate cyclase (GGDEF) domain protein, YfiN family
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PF1751_v1c46600
Enzymes [BR:
pfw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PF1751_v1c46600
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
RELT
Motif
Other DBs
NCBI-ProteinID:
AJP54354
LinkDB
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Position
complement(5161530..5162792)
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AA seq
420 aa
AA seq
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MTVVKVRPTLGSVIGRGHLILALVAVTLASVSLTLLGVLALRVYAEHNLHLIARSINYTV
EAAVVFNDSAAATEALSLIASTEEVAEAEVFDVNGTLLAKWIRPETGMLSRVELELAHTL
LEQPISQPILHQGQVIGSTHLTGHGGSLLRFLLSGLAGILICTALSAWIALHLARRLLRG
ITGPLQSLAAVAHAARSERDFDRRVPPAKIAELDSLGSDFNALLGEMEAWQSHLQSENES
LAHQANHDSLTGLPNRAFFEGRLIRALRSAAKAKEQVAVLYLDSDRFKEINDSFGHAAGD
AVLVAVAERVRAQLREDDLVARLGGDEFAILLAPLHKAQDAERIADKIIASMDLPIPVPG
NTQVLTSLSIGIAIYPDHGATPGALLNAADAAMYQAKRLSSGGQQTAESEHSAANVQHRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgtcaaagtgcggccgaccctgggttctgtcatcggccgaggacacctgatc
ctggcgctggtggccgtgaccctggcgagtgtctctctgaccttgctcggggtgctggcg
ttgcgggtctatgccgagcacaacctgcacctgatcgcacgttccatcaattacaccgtg
gaagcggcggtggtgttcaacgacagcgcggcggccaccgaagccctcagcctgatcgcc
tccaccgaagaagtggccgaggccgaagtcttcgatgtcaacggcacgttgttggcgaag
tggatacgcccggaaaccggcatgctttctcgggtcgagctggagctggcgcataccctg
ctcgaacaacccatcagccagccgatcctgcatcaaggccaagtcatcggcagcacccac
ctcaccggtcacggcggcagcttgctgcgcttcctgctcagcggcctggccgggatcctc
atctgcactgcgctcagcgcgtggatcgccctgcacctggcgcggcgcctgttgcgcggc
atcaccggcccgctgcaaagcctcgccgcggtggcccacgccgcgcgcagtgaacgcgac
ttcgaccgccgcgtacccccggcaaaaatcgccgaactcgacagcctgggcagtgacttc
aacgccttgctcggcgagatggaagcctggcaaagccatctgcaaagcgaaaacgaatcc
ctcgcccatcaggccaaccacgacagcctcaccggcctgcccaaccgtgcttttttcgaa
ggccgtttgattcgggcgctgcgcagtgcggccaaggccaaagaacaggtggcggtgctt
tacctcgacagcgaccgcttcaaagagatcaatgacagctttggccacgccgccggcgat
gcagtcctcgtcgccgtcgcggagcgcgtgcgtgcgcaattgcgtgaagatgacctggtg
gcgcgcttgggcggcgatgagttcgccatcctgctggcgccgttgcacaaggcgcaagac
gccgagcgtattgccgacaagatcatcgccagcatggacctgccgatccccgtgccaggc
aacacccaggtactgacgtcccttagcatcggcatcgccatctaccccgatcatggtgcc
accccaggtgccttgctcaatgccgccgacgcggcgatgtaccaggccaaacgtttgtct
tcgggcggccagcaaacggcggagtcggagcactcggccgccaacgttcaacacaggagc
tga
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