Pseudomonas simiae PCL1751: PF1751_v1c46640
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Entry
PF1751_v1c46640 CDS
T03766
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PF1751_v1c46640 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c46640 (recC)
Enzymes [BR:
pfw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PF1751_v1c46640 (recC)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PF1751_v1c46640 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJP54358
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All DBs
Position
complement(5169244..5172696)
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AA seq
1150 aa
AA seq
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MPDATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGKDEIPPKSLLDKAPLTWRLMRLLPEL
IDQPHFEPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
SKPLNPANCWQAELWRALLLDVGEEGMAESRAGVHQRFIERINTLEKAPGGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKAGMPVTI
DPQTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDSEPTTLLNQL
QDDILELRPLNETRELWPAVDLQRDTSIRFHIAHSAQREVEILHDQLLQRFSADPSLRPR
DVIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPKELEQNS
WRFGLRRMLLGYAVGTGAACDGIEPYDEIGGLDAALIGPLVALLDALSDAHQALSLPASP
TQWGERLQRLIQLFFLPSSEHDDYLLGQLEQLRETWLETCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSDRPASVLIGQLRDHLASGWHLAN
SDKPLIEAMTQEHPLQPFSARYFHEGDALFSYAREWQLLHEASDALPTEHDLAPHQQEEP
LSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLNAALTR
PDQLDQTLNAQALRLQGSGLLPMVGFGECLRNELIEPLPDLLRRYQQLLALWPTPHTGAE
PVSFEHHGVQLEGWISGLHRRSDGGLLSVTTIPNSIGSIKTRKWHRLIRPWVNHLVACAC
GLPLSTGLVASDDTLLLPPLDKANAQEVLGHLLLAWHAGMSKPLPVAVKTAFAWLSQTDP
VKAEAAAVKTYEGDGLNNEGERRETPALTRQFPDYATLIASEEFEGWCETLYRPLLNAPW
RSLTGEEASA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcgacgtccctcagcgctggattcatggtggttcacggcaatcgcctggac
gaactgcgcagcctggtggtcagctggatgcgccgctaccccctggctcccctggaaaac
gaaatcgccctggtccaaagcaacggtatcgcccagtggctcaagctggccctggcggaa
gatccggaagacgacgacatggggggttgcggcatcgccgccgccatcgatgttcaacta
cccggcagctttatgtggcagctctaccgtatggtcttgggaaaagatgaaattccgccc
aaatccctgctcgataaagccccgctgacgtggcgcctcatgcgcctgcttccggagctt
atcgatcaaccgcacttcgaaccactccagcgctttctcacccacgacaccgatttgcgc
aaacgctaccaactcgccgagcgtctggctgacctgttcgaccaatatcaggtctaccgt
gccgattggctcgaagactgggctgccggccgccaccagctgcgcaacggtcgaggcgaa
tccaagccactcaaccctgccaactgctggcaagccgaactatggcgagcactgctgctg
gatgttggtgaagaaggcatggccgaaagccgcgccggcgttcatcagcgctttatcgag
cgcatcaatacactggaaaaagcgcccgggggcctgccatcccgagtcatcgttttcggc
atttcctcgttgcccgcccaggcactggaagccctcgccggcctcgcgcgattcagccaa
gttctgctctgcgtgcacaacccttgccgccaccattggtccgacatcgtcgccgacaaa
gacctcctgcgtaacgaatacaaacgccaggcgcgcaaagccggcatgccggtcaccatc
gacccacaaaccctgcaccagcacgcccacccgctactggccgcctggggcaaacaaggc
cgtgactacatcagcctgctggacagctacgacgaccccaatagctaccgcgctgcattc
cgcgatggccgcatcgacctgttcagcgacagcgagcccaccacactgctcaatcaactc
caggacgacatcctggagttgcgtccactcaatgaaacacgcgagctatggcctgctgtc
gacctgcaacgtgatacctcgattcgcttccacatcgcccacagcgcgcagcgagaagtg
gaaattctccacgaccaactgctccaacgcttcagtgccgacccctcgctgcgcccgcgg
gatgtcatcgtcatggtcccggatgtcgacagctatgcgccgcacatccgcgccgtgttc
ggccaactcgaacgcaatgacccacgcttcatcccgttcaccctgaccgaccaaggccaa
cgcggccgtgacccgctgctcatcgccgtcgaacacctgctgaaactgcccgacagccgc
ttcccggtcagcgagatcctcgatctgctcgacgtgccggccctgcgcgaacgcttcgcc
atcaaggagcgcgacctgcccacgctgcatcgctggatcgaaggcgccggcatccgctgg
gggctcaacgccgaacaacgtgccggtctgggcctgccaaaagaactggaacaaaacagc
tggcgtttcggcctgcgccgcatgttgctcggttacgccgtcggcaccggcgccgcgtgt
gatggtatcgagccctacgacgaaatcggtggccttgatgcggcgctcatcggccctttg
gtcgctttgctcgacgcactcagcgatgcgcatcaagcgttatcactgccggcttcaccg
acgcaatggggcgagcgcttgcaacgcctgatacaactgttcttcctacccagcagcgag
cacgatgactacctgctgggccaactcgaacaactcagggaaacctggctggaaacctgc
gaatccgtcggcttgcaagacgaattacctctcacagtggtccgcgaggcctggcttgcg
gggctggaccaaggtcgcctgtcccaacgcttcctcgccggggctgtcaatttctgcact
ctgatgcccatgcgtgcgatcccgttcaagctcgtttgcctgctcggcatgaacgacggt
gattacccgcgcgcgcaaccaccgctggacttcgacctgatgggcagcgactaccgccca
ggcgaccgctcacgccgtgaagacgaccgctacctgctgctcgaagccctgctttcagca
cgtgaccagctctacgtcagttgggtcggccgcagcatccgcgacaacagtgaccgccca
gcgtcggtactcatcggccaactgcgtgaccatctcgccagtggctggcacctggcaaac
agtgacaaaccgctgatcgaagccatgacccaagagcatccgctgcaaccgttcagcgcc
cgttacttccatgaaggcgatgcgctgttcagctacgcgcgcgaatggcagttgcttcat
gaagcctccgatgccctcccgacagaacacgacctggctccccaccaacaggaagaaccc
ctgagtctcggccagctccaagacttcctgcgcaacccggtcaaacacttcttcagccag
cgcctgaaagtattcttcgaagccgccgaagtgccgctggccgacgaagagccttttgtt
ctcgacgcactgcaacgctacagcctgagtgacagcctgctgaatgccgcgctcacccga
cccgatcagctcgaccagaccctgaacgcccaggccctgcgcctgcaaggcagtggcctg
ttgccgatggttggtttcggcgaatgcctgcgcaacgaactgatcgagcctttacccgat
ctgttgcgacgctatcagcaattgctcgccctttggcctaccccgcacaccggtgccgaa
ccggtcagttttgagcatcacggcgtgcagttggaaggctggatcagcggtctgcatcga
cgcagtgatggcgggttgctaagcgttaccaccattcccaacagcatcggctcgatcaag
acccgcaagtggcatcgcctgattcgcccttgggtcaatcacctggttgcctgtgcgtgc
ggtctgccgctgagcaccggcttggtggccagcgatgacaccctgctgctgccgcctctg
gataaagccaatgcccaggaagtcctcggccacttgctgctcgcctggcatgccggaatg
agcaaaccgttgcccgtggccgtcaaaaccgctttcgcgtggctcagccagaccgacccc
gtcaaggccgaagcagccgcagttaaaacctacgaaggtgatgggctcaacaacgaaggc
gaacgccgcgaaacgccggcgctcacccggcaattccccgattacgccacactcatcgcc
agtgaagaattcgaaggttggtgcgaaaccctgtatcgcccgctgctcaacgccccgtgg
cgatcactcaccggcgaggaggccagcgcatga
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integrated database retrieval system
