Pseudomonas simiae PCL1751: PF1751_v1c46900
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Entry
PF1751_v1c46900 CDS
T03766
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PF1751_v1c46900 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfw03019
]
PF1751_v1c46900 (pcnB)
Enzymes [BR:
pfw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PF1751_v1c46900 (pcnB)
Messenger RNA biogenesis [BR:
pfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PF1751_v1c46900 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AJP54383
LinkDB
All DBs
Position
5203290..5204693
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AA seq
467 aa
AA seq
DB search
MLKKLFQSFRSPLRRTQHKRSTPEVLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAG
HPQNDEEEDTNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNNLIRLIGDPVQRYQEDPVRMLRAVRFAAKLNFGIERHTAAPIRELAPMLREIPSA
RLFEEVLKLFLSGYAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPKRVLRLQERGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSGRRDMIRELGSKGDGEGAGPKKRRRSGTKRKRSSADASGAAGE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcattccgttctcccttgcgtcgtacgcaacacaaacgc
agcacgcctgaagtgctcaacagcagccaacattcgctgcaacgcgctcaattcagccgt
tacgccgtgaacatcgtcgaacgtttgcagaacgccggctaccaggcttatctggtgggc
gggtgcgttcgcgacatgctgctcaatatcacacccaaggacttcgacgtcgccaccagc
gccacgcctgagcaagtgcgtgccgaattccgcaatgcgcggatcattggccgacgcttc
aagctggtgcatattcacttcggtcgcgaaatcatcgaagtcgcgacgttccgtgccggc
catccgcaaaacgatgaagaggaagacaccaatcagtcctcccgcaacgaaagcgggcgc
atcctgcgcgacaacgtttacggcaccctggaagaagacgcgcaacgccgcgacttcacc
atcaacgccctgtattacgacccggtcagcgagcgcatcctcgattacgccaatggcgta
cacgacattcgcaacaacctgatccgcctgatcggtgaccccgtccagcgctaccaggaa
gacccggtacgcatgctgcgggccgtgcgttttgctgccaagctgaacttcggcatcgag
cgccataccgccgcgccgattcgcgaactggccccgatgctgcgagagatcccctcggcg
cgcctgttcgaagaagtgctcaaactattcctctcgggttatgccgccgacacctttgaa
atgctggtggacctgcagttgttcgacccgctgttcccggccagcgccgaggctttggaa
tacaacccgacgtacacccacaccctgatcagcgaagcgctgatcaacaccgacctgcgc
atcaagcagaacaagccggtcaccccggcgttcctgtttgcagcgctgttgtggccagcc
ttgcccaaacgcgtactgcgcttgcaggaacgtggcatgccgccgatcccggccatgcag
gaagccgcccatgagttgatcgccgagcagtgccagcgcatcgccatcccgaaacgcttc
accatgccgatccgcgagatctgggacatgcaggagcgtctgccacgccgcagcggcaaa
cgcgctgacctgttgctggacaacccacgcttccgcgccggctacgacttcctgctgctg
cgcgaaagtgccggcgagcagaccgacggcctgggcgaatggtggaccgattaccaggac
gccaatgacagcgggcgccgcgacatgattcgtgagctcggcagcaaaggcgatggcgaa
ggcgccggccctaagaagcgtcgtcgcagcggcaccaaacgcaagcgcagttcggctgac
gcctcgggcgctgcgggcgaataa
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