Pseudomonas simiae PCL1751: PF1751_v1c48290
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Entry
PF1751_v1c48290 CDS
T03766
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03030
DNA replication
pfw03430
Mismatch repair
pfw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PF1751_v1c48290 (holA)
03430 Mismatch repair
PF1751_v1c48290 (holA)
03440 Homologous recombination
PF1751_v1c48290 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfw03032
]
PF1751_v1c48290 (holA)
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c48290 (holA)
Enzymes [BR:
pfw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PF1751_v1c48290 (holA)
DNA replication proteins [BR:
pfw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PF1751_v1c48290 (holA)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PF1751_v1c48290 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AJP54522
LinkDB
All DBs
Position
5365008..5366045
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLAKHLQGGLAPVYIVSGDDPLLCQEAADAIRTAARQQGFDERQVFSADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALMEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGAHTQFIQIWPVDSNQLPQWIRQRLSQSGLSATQDAVELIAARVEGNLL
AAAQEIEKLKLMAEDGQITVETVQGAVADSARFDVFGLVDAILNGEPAHALRMLEGLRGE
GVEPPVILWALARELRVLANIALQYSQGTPLDKAFSQARPPVWDKRKPLMSKALQRHSAQ
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLTLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgctcccgcccaactcgccaaacacctgcaaggtggccttgcgcctgtctat
atcgtcagcggcgatgacccgctgctgtgccaggaagccgccgacgccatccgcaccgcg
gcacgccagcaaggcttcgacgaacgccaggtcttcagcgccgacgccagtttcgactgg
ggcacgctgctgcaagctggcgcaagcatgtcgctgtttgccgaaaaacgcctgctggaa
ctgcgcctgccttcgggcaagcctggcgacaaaggcgctgccgccttgatggaatactgc
tcacgcccggccgaagacacggtgctgctgatcagcctgcccaagctcgacggcagtgcg
cagaaaaccaaatggggcaaggccttggtggaaggggcccacacccagttcatccagatc
tggccagtggacagcaaccagctaccgcagtggattcgccagcgcctgtcccaatcgggg
ctgtcggcgacccaggatgcggtggagctgatcgccgcccgggtcgaaggcaacttgctt
gccgccgcccaggagatcgaaaagctcaagctgatggccgaagacgggcagattaccgtc
gagaccgtccagggcgccgtggcggatagcgcacgctttgatgtgttcggactggtggac
gcgatccttaatggcgaacccgcccacgccctgcgcatgctcgaaggcctgcgtggcgaa
ggggtggaaccaccggtgattctctgggccctggcccgtgaactgcgcgtactggccaat
attgccctgcaatacagccagggcacgccgctggacaaggccttcagccaagcccggccg
ccggtatgggacaagcgcaaaccgctgatgagcaaagcgctgcagcggcactcggcgcaa
cgctgggcgcaactcttgctggaagcgcagcgcatcgacgcacagatcaagggccaggcg
gccggttcgccatggatgagcctgagccgtttgtcgctgttgatggccggccagcgcctg
accctccccgccgaataa
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