KEGG   Pseudomonas simiae PCL1751: PF1751_v1c48970
Entry
PF1751_v1c48970   CDS       T03766                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pfw  Pseudomonas simiae PCL1751
Pathway
pfw00740  Riboflavin metabolism
pfw01100  Metabolic pathways
pfw01110  Biosynthesis of secondary metabolites
pfw01240  Biosynthesis of cofactors
pfw02024  Quorum sensing
Module
pfw_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pfw00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PF1751_v1c48970 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PF1751_v1c48970 (ribD)
Enzymes [BR:pfw01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PF1751_v1c48970 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PF1751_v1c48970 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Phage_Gp84
Other DBs
NCBI-ProteinID: AJP54590
LinkDB
Position
complement(5438161..5439297)
AA seq 378 aa
MNPLPAEQAVLDAHYMARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHA
EPNALRAAGARARGATVYVTLEPCSHHGHTPPCADALVTAGVARVVAGMQDPNPEVAGRG
MQRLAQAGIEVRSGVLEAEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMANGESQWI
TGPAARAAVQRLRAEASVVLTGADTVLADGARLTVRAAELGLDEATTALAMSRPPLRVLI
DGRLRVPLNAPFFKAGPALVITCVTPENQFPRGPECLVVPGVDGQVDLRSALVALAARGV
NEVLVEAGPSLAGAFAQQGLVDEYVIFIAGKFLGSAARPLLDWPLEKLANAPQLKITEMR
AVGDDWRVTAIPVPAASV
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgaacccactgcctgccgaacaagctgtgctcgacgcccattacatggcccgtgccctg
gaactggcgcgcaagggcctgtacaccacccatcccaacccgcgtgtggggtgcgtgatt
gtacgtgacgggcagattgtcggcgaaggctggcatgagcgaaccggcgaaccccatgcc
gagcccaatgccctgcgcgccgctggtgccagggcccgtggcgccacggtgtatgtgacc
ctcgaaccgtgcagccaccacgggcatacgccgccctgcgctgatgcgttggtcactgcg
ggtgtcgctcgcgttgtggctggcatgcaggacccgaaccccgaagtggcggggcgcggc
atgcagcgcttggctcaggccggtattgaggtccgtagcggggtgctggaagctgaagcg
cgcgcgctgaatccaggtttcctcaagcgcatggaacacggcctgcccttcgtgcgggtc
aagctggcgatgagcctggacggccgcaccgcgatggccaacggcgaaagccaatggatc
accggccccgccgctcgcgccgccgtgcagcgcctgcgcgccgaggccagcgtggtgctg
accggcgccgatacggtgctggccgacggggcacgcctgaccgtgcgcgccgccgaactc
ggcctggacgaagccaccaccgccctggccatgtcacgtccgccgttgcgggtgttgatc
gacggccgcctgcgcgtgccgctcaatgcgccgttcttcaaggccgggccggcgctggtc
atcacctgcgtaaccccggaaaaccagtttccccgtggccccgagtgcctggtggtaccg
ggcgtcgatggtcaggtcgacctgcgctcggcgctggtcgcgctggcagcccgtggcgtc
aatgaagtgttggtggaggccggcccaagcctggccggtgcgtttgcccagcaaggcctg
gtggatgaatacgtgattttcatcgccggcaagttcctcggctccgccgcccggcctttg
ttggactggccgcttgagaaactggccaacgccccccaactcaagatcactgaaatgcgc
gctgtaggcgacgactggcgagtcactgccatccctgtgccagcagcgagcgtataa

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