Pseudomonas simiae PCL1751: PF1751_v1c49810
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Entry
PF1751_v1c49810 CDS
T03766
Symbol
vfr
Name
(GenBank) cyclic nucleotide-binding transcriptional regulator Vfr
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw02020
Two-component system
pfw02024
Quorum sensing
pfw02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PF1751_v1c49810 (vfr)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PF1751_v1c49810 (vfr)
02025 Biofilm formation - Pseudomonas aeruginosa
PF1751_v1c49810 (vfr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfw03000
]
PF1751_v1c49810 (vfr)
Transcription factors [BR:
pfw03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
PF1751_v1c49810 (vfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
TrmB
MarR
MarR_2
bAvd
HTH_11
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AJP54673
LinkDB
All DBs
Position
5519838..5520482
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AA seq
214 aa
AA seq
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MVALTPIPKIKNLDKLLMHCQRRRHPAKHNIICAGERSETLFFIIKGSVTILIEDDDGRE
MIIAYLNTGDFFGELGLFEQAGKEQERSAWVRTKVECEVAEISYAKFRELSQHDPDILYA
LSGQIAQRLRDTTRKVGDLAFFDVTGRVARCLLDLCKQPDAMTHPDGMQIKVTRQEIGRI
VGCSREMVGRVLKDLEERNLVHVKGKTMVVFGTR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggttgcccttactcccatacccaaaatcaagaatctcgacaaactgttgatgcattgc
cagcgccgtcgtcacccggccaagcacaacatcatctgcgccggcgaacgctccgaaacg
ctgttcttcatcatcaaaggctcggtcaccatcctgatcgaggatgacgacggtcgcgaa
atgatcattgcttacctgaacaccggggatttctttggggagttggggctgttcgaacaa
gccggcaaggaacaggaacgcagcgcctgggtgcgcaccaaggtcgaatgcgaagtggcc
gagatcagctacgccaagttccgcgaactgtcccagcacgatcccgacattctctacgcc
ctgagcggccagattgcccagcgcctgcgggacaccacccgcaaggtcggcgacctcgcg
ttctttgacgtcaccggccgagtcgcgcgttgcctgctggacctgtgcaagcagcccgac
gccatgacgcaccccgacggcatgcagatcaaggtcacgcgccaggaaatcgggcgcatt
gtcggctgttcacgggagatggtcggtcgcgtgctcaaggatctggaagagcgcaacctg
gtgcatgtcaaaggcaagacgatggtggtgttcggtacccgttaa
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