Pseudomonas simiae PCL1751: PF1751_v1c50530
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Entry
PF1751_v1c50530 CDS
T03766
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03030
DNA replication
pfw03430
Mismatch repair
pfw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PF1751_v1c50530
03430 Mismatch repair
PF1751_v1c50530
03440 Homologous recombination
PF1751_v1c50530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfw03032
]
PF1751_v1c50530
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c50530
Enzymes [BR:
pfw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PF1751_v1c50530
DNA replication proteins [BR:
pfw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PF1751_v1c50530
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PF1751_v1c50530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AJP54745
LinkDB
All DBs
Position
5602421..5603128
Genome browser
AA seq
235 aa
AA seq
DB search
MSLFNWLRKKKPGLDSAQQQRLAQLRSPTPLGNNTLRNQRWVVVDLETSGLNLNRDQVLS
IGAVVIEDGAVDFSQLFERTLQRAETKLSPSVLIHGLGPSAIAAGSDPVDALLDFMDFVG
DSPLLAFHAPFDQHMLCRALKDSLGYRLTHPFLDVADIAPLLCPEAHIREAGLDDWINHF
NLHVGERHHASADALATAELMLILFSRARQQHIDTPQVLQERLSQWKRRQHAPSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttgttcaactggctgcgtaagaaaaagccggggctcgacagtgcgcaacaacag
cgcctggcgcaactgcgcagtcccacgccactgggcaacaacaccctgcgcaaccagcgc
tgggtggtggtggacctggaaaccagcggcctcaacctcaatcgtgatcaggtactgtcc
atcggcgcggtcgtgatcgaagacggtgcggtggatttctcgcaactgttcgaacgcacc
ctgcaacgggctgaaaccaaactcagccccagcgtgttgatccacggcctcggccccagt
gcgatcgcggccggcagcgatccggtggacgcgttgctggacttcatggactttgtcggt
gacagcccattactcgccttccatgcgccgttcgatcaacacatgctgtgccgggcactc
aaggacagcctgggttaccgcctgacccatccgtttctcgacgttgcagacatcgcccct
ctgttatgccccgaggcgcacatccgcgaagccgggctggacgattggatcaatcacttc
aacctgcacgtgggcgagcgtcatcacgccagcgccgatgccctggccacggcggagctg
atgctcatcctgttcagccgcgcgcgccagcagcacatcgatacgccacaggtattgcaa
gagcgtttgagccaatggaaacggcgtcaacacgcgccatcgttttaa
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