Pseudomonas simiae PCL1751: PF1751_v1c52110
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Entry
PF1751_v1c52110 CDS
T03766
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PF1751_v1c52110 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfw03400
]
PF1751_v1c52110 (mutM)
Enzymes [BR:
pfw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PF1751_v1c52110 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PF1751_v1c52110 (mutM)
DNA repair and recombination proteins [BR:
pfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PF1751_v1c52110 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
AJP54903
LinkDB
All DBs
Position
complement(5769655..5770467)
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGMPAAKHEHVDIELESGLALRYTDPRRFGAMLWSQD
PHNHELLIRLGPEPLTDLFDGERLFQLSRGKSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRRAAGGISRGRYLKLAIEIKRVLAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGEACKVCGSELRNVVLGQRASVFCPKCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttacccgaagtcgaaaccacccggcgtggaatcgcgccgcacctggaaggc
cagcgggtcagccgcgtggtggtgcgtgaacgacgcttgcgctggccgatcccggaagac
ctcgatgtgcgcctgtccgggcagcgcatcgtgctggtggaacggcgggccaagtacctg
ctgatcaatgccgaagtgggcaccttgatcagccacttgggcatgtccggcaacttgcgc
ctggtggaggtcggcatgccggcggccaagcatgagcatgtggatatcgaattggagtcg
ggcctggccctgcgctacaccgaccctcggcgtttcggcgcgatgctctggagccaggac
ccgcacaaccacgaactgctgatccgcctggggcccgagccgctgactgacctgtttgac
ggcgagcgcctgttccaactgtcccgtggcaagtcgatggcggtgaagcccttcatcatg
gataacgcggtggtggtgggcgtgggcaatatctatgcgacggaagcgctgtttgcggca
gggattgatccgcgtcgggccgctggcggcatttcgcgcgggcgttacttgaagctggcc
atagagatcaaacgtgtgctggctgctgccatcgaacgcggcggtaccacgttgcgtgac
tttatcggcggcgacggacagccggggtatttccagcaggaactgttcgtctatggccgg
ggcggtgaggcgtgcaaggtctgcgggagcgaattgcgcaatgtggtgctggggcagcgg
gcgagtgtgttttgccctaagtgccagcgctga
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