Pseudomonas simiae PCL1751: PF1751_v1c53520
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Entry
PF1751_v1c53520 CDS
T03766
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw00300
Lysine biosynthesis
pfw00470
D-Amino acid metabolism
pfw01100
Metabolic pathways
pfw01110
Biosynthesis of secondary metabolites
pfw01120
Microbial metabolism in diverse environments
pfw01230
Biosynthesis of amino acids
Module
pfw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PF1751_v1c53520 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PF1751_v1c53520 (lysA)
Enzymes [BR:
pfw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PF1751_v1c53520 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJP55044
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Position
5917796..5919043
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAQRFGTPTYVYSRAHIEAQYRSFTDALDGVSHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH
CFNIESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDHLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLIADYIKAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPRASKARAYDIVGPICETGDFLAKDRQLALEEGD
LLAIHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgttgtccgcg
atagcccagcgctttggcaccccgacctatgtgtattcgcgtgcgcatatcgaagcccag
taccgctcgttcaccgacgccctcgacggcgtgtcgcacctggtgtgctacgcggtcaag
gccaactccaacctcggcgtactgaatgtcctggcgcgattgggcgctggtttcgacatc
gtctcccgtggcgagctggaacgtgtgctggccgctggcggcaaggctgaaaagatcgtg
ttctccggcgtcggcaagacccgcgaagacatgcgtcgcgccctggaagtcggcgtgcac
tgcttcaatatcgaatccaccgacgagctggagcgcctgcaggtcgtggccgccgagatg
ggcgtgcgtgcgccgatctccctgcgcgtcaatccggacgtcgatgccgggacccaccca
tacatctccaccggtctcaaagagaacaagttcggcatcgctattgccgacgccgaggat
gtgtacatccgcgccgcccaactgccgaacctggaagtactgggcgtcgactgccatatc
ggctcgcaactgaccacgctgccgccattcctggatgcgctcgatcacctgctggcgctg
atcgaccgtctcggcgaatgcggcatctacctgcaccacatcgacctcggtggcggcgtg
ggcgtgcgttatcgcgatgaagagccgccgctgattgccgactacatcaaggctgtgcgc
gagcgtatcgaaggccgcgacctgacgctgatgttcgagcctggccgctacatcgtcgcc
aacgctggcgtgctgctgacccaggtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
aatgtcaccgccgtgacgcctcgcgcaagcaaagcccgcgcctatgacatcgtcggcccg
atctgcgagaccggtgacttcctggccaaggatcgtcagctcgcgctggaggaaggcgat
ctgctggccattcattcggccggtgcctacgggtttgtcatgagttccaactacaacacc
cgcgggcgtaccgccgaggtgctggtggacggtgatcaagcgtttgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa
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