Pseudomonas simiae PCL1751: PF1751_v1c54380
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Entry
PF1751_v1c54380 CDS
T03766
Symbol
clpV
Name
(GenBank) type VI secretion ATPase ClpV
KO
K11907
type VI secretion system protein VasG
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw02025
Biofilm formation - Pseudomonas aeruginosa
pfw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PF1751_v1c54380 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PF1751_v1c54380 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfw02044
]
PF1751_v1c54380 (clpV)
Secretion system [BR:
pfw02044
]
Type VI secretion system
Imp/Vas secretion system core components
PF1751_v1c54380 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Zeta_toxin
AAA_25
Sigma54_activat
nSTAND3
TniB
AAA_7
ATPase_2
NACHT
AAA_14
AAA_18
Torsin
Clp_N
CbiA
Hpr_kinase_C
SRP54
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
AJP55130
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All DBs
Position
6010197..6012875
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AA seq
892 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSSEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNTETL
LSAERERLETLESRWAEEKALVDELLATRATLREKVGVVDSPAGNNESDELRAQLVDLQQ
RLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDH
ALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMS
EFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFD
KGVMEDGEGRVIDFKNTLILLTTNAGTELISQVCKDPANVPEPEEIAKALRQPLLEIFPP
ALLGRLVTIPYYPLSDEMLKAITRLQLNRIKKRVETTHKVAFDYDDAVVDLIVSRCTETE
SGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISSRDNELHYDFSDAD
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcactgttcggcaaactcaacagcgtggcctacaaggcc
atcgaagccgccaccgtgttctgcaagctgcggggcaacccgtatgtggaactggctcac
tggtttcaccagttgctgcaactgcaggactcggacctgcaccgcatcatccgtcagttc
aacgtggagccggcgcgcctggcccgtgacctcaccgaagcgctggatcgtttgccgcgt
ggctcgacctcgatcaccgacctgtcctcgcatgtggaagaagcggttgagcgcggctgg
gtctacggcagcctgatgttcggtgaaagccaagtgcgcaccggttacttggtgcttggt
atcttgaagacacccagcctgcgtcatgcgttgctgggcttgtcgtcggaattcgacaag
atcaaggccgaagccctgagcgagcgctttgacgaatacgtcggcgattcgccggaaaat
gccctgagcgcaagcgacggtttcaacgccggcgccgttccgggcgaagccagcggtgcg
atggcgccgagtgcgatgggcaagcaggaagccctcaagcgtttcacggtcgacctgacc
gaacaggcgcgcagcggcaaactcgacccgattgttggccgtgatgaagaaatccgccaa
ctggtcgacatcctcatgcgccgccgccagaacaacccgatcctcaccggtgaagccggg
gtgggcaagaccgcggtggtcgaaggtttcgccctgcgtatcgtcgccggtgacgtgccg
ccagcattgaaagacgtggaactgcgcagccttgatgtgggcctgctgcaagccggcgcc
agcatgaaaggcgaattcgaacagcgcctgcgccaggttatagaagacgtgcaggcctcg
cccaagccgatcattctgtttatcgacgaagcccacacactggtgggtgccggtggtgcc
gccggcaccggtgatgcagccaacctgctcaagccggcgttggcacgtggcaccttgcgc
accgtggccgcgaccacctgggccgagtacaagaagcacatcgagaaggacccggcgctg
acccggcgtttccaggtggtgcaagtcgccgagccgtcggaggacaaggcgctgctgatg
atgcgcggcgtggcgtcgaccatggaaaaacaccaccaggtgcagatcctcgatgaggcg
ctggaagcctcggtgaagctatctcatcgctacattccagcgcgccagttgccggacaag
tccgtgagcctgctggacaccgcctgcgctcgcgtcgccatcagcctgcacgcggttccg
gccgaagtggacgacagccgccgtcgcatcgaagccctggaaaccgagttgcagatcatc
gcccgcgaacacgccatcggcattgcaattggtgcgcgccagaccaacaccgagacgctg
ttgagcgctgagcgtgagcgtcttgaaaccttggaaagccgttgggctgaagagaaagcg
ctggtagatgagctgctcgccacccgggcaacgttgcgcgaaaaagtcggtgtcgtggac
agccctgccgggaacaacgagagcgatgaattgcgcgcccagctggtcgacctgcaacaa
cgcctgaccgcgctgcaaggcgaaaccccactgatcctgcccaccgtggattaccaggcc
gtggcctcggtggtcgccgactggaccggcatcccggtcggccgcatggcgcgcaacgag
ctggaaacggtgctcaacctcgaccagcacctgaagaaacgcatcatcggccaggaccac
gccctgcagatgatcgccaagcgcatccagacatcccgcgccggcctcgacaacccgagc
aagccgattggcgtgttcatgctggccggcacctccggcgtgggcaagaccgaaaccgcc
ctggccctggccgaagccatgtacggcggcgagcagaacgtcatcaccattaacatgagc
gaattccaggaagcccatacggtgtcgaccctcaagggcgcacctccgggctatatcggc
tacggcgaaggcggcgtgctgaccgaagcggtacggcgcaaaccctacagcgtggtgctg
ctggatgaggtggaaaaagcccacccggacgtgcatgaaatcttcttccaggtgttcgac
aagggcgtgatggaggacggcgaaggccgggtgatcgacttcaagaacaccctgatcctg
ctgacgaccaacgccggcaccgagctgatttcccaggtgtgcaaagacccggcgaacgtg
ccggagccggaggaaatcgccaaggccctgcgccagccgctgctggagattttcccgcct
gcgctgctcggccgcctggtaaccatcccttactacccgctgagcgacgagatgctcaag
gcaatcacccgcctgcaactcaaccgcatcaagaagcgtgtggagacgacgcacaaagtg
gccttcgattacgacgacgcggtggtcgacctgatcgtctcgcgttgcaccgagaccgaa
agcggcgggcgcatgatcgacaccattctcaccaacagcctgctgccggacatgagccgt
gagttcctcacgcgcatgctcgaaggcaaggcgttggcgggggtacggatcagcagccgg
gataatgaattgcactacgacttcagcgacgcagattga
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