Pseudomonas lurida: A7318_00340
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Entry
A7318_00340 CDS
T04730
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfx
Pseudomonas lurida
Pathway
pfx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A7318_00340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfx03021
]
A7318_00340
Transcription machinery [BR:
pfx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A7318_00340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
PhyR_sigma-like
HTH_31
Sigma70_ECF
HTH_24
HTH_3
HTH_40
HTH_Tnp_4
HTH_11
MarR_2
HTH_7
HTH_38
HTH_36
HTH_68
Fe_dep_repress
HTH_IclR
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AOE77071
LinkDB
All DBs
Position
complement(86269..86778)
Genome browser
AA seq
169 aa
AA seq
DB search
MDTATDGQHQLHLLYRDHHGWLQGWLRKRLGDREHAADVAQDTFLRLLVSGRFPGDKESR
SYLAQIARNLVIDQWRRLRIERAYLESIAHLPEPESPSLETRALILETLMQIDAMLDRMP
DNVRQAFMLSQFEGLSYAQIAERLGVTVSSVQKYMTRAIVACYQVAYEE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcgactgacggccagcatcagcttcacctcctgtaccgcgaccatcacggc
tggctgcaaggctggctgcgcaagcgcctgggcgaccgcgagcatgcggccgatgtggcg
caggacaccttcctgcgcctgttggtgtccgggcgttttcccggcgacaaggaaagccgc
agctacctggcgcagatcgcacgcaacctggtgatcgaccaatggcggcgcctgcgtatc
gagcgtgcctacctggaaagcattgcgcacttgcccgagccggaatcgccgtccctggaa
acccgcgcgctgatcctcgaaaccctgatgcagatcgacgccatgctcgatcgcatgccc
gacaacgtgcgccaggcgtttatgctgtcgcagttcgaaggcttgagttatgcacagatc
gccgaacgcttgggcgtgacggtcagctcggtgcagaagtacatgacccgcgcaattgtt
gcctgctaccaggtggcctacgaagaatga
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