Pseudomonas lurida: A7318_05250
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Entry
A7318_05250 CDS
T04730
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pfx
Pseudomonas lurida
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfx03009
]
A7318_05250 (rimO)
Enzymes [BR:
pfx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A7318_05250 (rimO)
Ribosome biogenesis [BR:
pfx03009
]
Prokaryotic type
ribosomal protein modification factors
A7318_05250 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
DUF730
Motif
Other DBs
NCBI-ProteinID:
AOE78009
UniProt:
A0A5E6MS13
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All DBs
Position
complement(1190674..1192014)
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AA seq
446 aa
AA seq
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MSTTIAKANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHEVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPE
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDLAVVPDDVK
QDRWERFMAHQQAISSARLQLRIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDDAS
GLKPGDKVWCTVTDADEYDLWAEKRA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccatcgcaaaggccaaccccaaggttggctttgtttccctgggttgcccg
aaggctctggtcgactccgagcgcatcctcacgcaactgcgtatggaaggctatgacgtt
gtgtccacctaccaggacgccgacgtggtggtggtcaacacctgcggcttcatcgactcg
gccaaggcagagtcgctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtggaagaaggcaatatccgcaacgtgcacccgagcgtgctg
gccgtgaccggcccgcagcagtacgagcaggtggtcaacgcggtgcacgaagtcgtgcca
ccgcgccaggaccacaacccgctgatcgacctagtgccgccgcaaggcatcaagctgaca
ccacgccattacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcattccgtcgatgcgcggcaagctggtgagccgcccagtcggcgacgtactggacgag
gcccagcgcctggtcaaatccggcgtcaaagagctgttggtgatctcccaggacaccagc
gcctacggcgtcgacgtgaaataccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactgtgcgaagccctcagcagcctgggtgtgtgggtgcgcctgcactat
gtctacccgtacccgcatgtggacgagctgatcccgctgatggctgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtgctcaaggccatgaaacgc
cccgctttcgaagacaagaccctggcgcgcatcaagaactggcgcgagatctgcccggaa
ctgatcatccgctcgaccttcatcgtcggcttccccggcgaaaccgaggaagacttccag
tacctgctggactggctgaccgaagcccagctggaccgcgtcggctgcttccagtactcg
ccggttgaaggtgccccggccaacctgctggacctggccgtggtaccggacgacgtcaag
caggaccgttgggagcgtttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
ctgcgcatcggcaaggaaatcgaagtactgatcgacgaagtcgatgagcaaggcgccgtt
ggccgatgcttcttcgatgcgccggaaatcgacggtaacgtctttatcgacgacgccagc
ggcctgaagccgggcgacaaggtctggtgcaccgtgaccgatgccgacgaatacgacctg
tgggctgaaaagcgcgcctga
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