Pseudomonas lurida: A7318_06935
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Entry
A7318_06935 CDS
T04730
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfx
Pseudomonas lurida
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfx03032
]
A7318_06935
03400 DNA repair and recombination proteins [BR:
pfx03400
]
A7318_06935
Enzymes [BR:
pfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A7318_06935
DNA replication proteins [BR:
pfx03032
]
Prokaryotic type
DNA Topoisomerases
A7318_06935
DNA repair and recombination proteins [BR:
pfx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A7318_06935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AOE78336
LinkDB
All DBs
Position
1558963..1561584
Genome browser
AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNEYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGE
GPVLTPKEKARKQLVSRMGVDPEHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD
REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSKPGELDIDRVNAQQARRFLDR
VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEVHADLGTAKGAN
VRFEVAREKGEAFKPLNEAQAMAALDKLKASSYSIVKREDKPTSSKPSAPFITSTLQQAA
SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSVDAVAMARTYIESEFGKKYLPEKPN
VYSSKEGAQEAHEAIRPSDANTEPSKLSGMERDAERLYELIWRQFLACQMLPAQYLSTTV
SVGAGDFELRAKGRILKFDGYTRVMPQIAKPGDDDVLPDMAQGDTLKLIKLDPSQHFTKP
PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLSES
FSNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAESPESGMRANQPVMT
DIPCLTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL
RGKHRCPICSTAMDAYLLDEKHKLHICGNNPDCDGYEIEEGSYRIKGYEGPSLECDKCGS
EMQLKTGRFGKFFGCTNPTCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGA
SGLFLAASQFPKNRETRAPLVLEIVPHKDEIDPKYHFLCEAPKKDPDGRPAVIRYSRKTK
EQYVQSEVDGKPTGWKAFYDGGKWKVEDKRQGA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggctaaggccaagaccatcaacaagtac
ttgggcaacgagtacgtggtgaagtcgagtatcggccatatccgagacctgcccaccagc
ggttcggctagcgccagcaaggagcctgccgccaagcgcggcaaggccgctgcaggcgaa
ggtccggtactcacccctaaagagaaagcgcgcaagcagctggtctcgcgcatgggtgtg
gacccggaacatggctggaaggccaagtacgaaatccttcccggcaaggaaaaggtcatc
gaagagctgcgccggctcgccaaggatgccgacaccatctatctcgcgacggacttggac
cgcgaaggggaagccattgcctggcacctgcgggaagccattggcggtgacgacagccgc
tacaagcgcgtggtgttcaacgagatcaccaagaaagccatccaggaagccttttccaag
ccaggcgagctggacatcgaccgcgtcaatgcccagcaggcccggcgtttcctcgaccgt
gtcgtgggctacatggtctcgccactgctgtgggccaagatcgcccgtggcctgtccgcc
ggccgtgtgcaatcggttgcagtgaagctggtggtggagcgtgagcgcgagatccgtgcg
ttcatccccgaagagtactgggaagtccacgcagacctcggtaccgccaagggcgccaac
gtgcgcttcgaagtggcccgcgagaaaggcgaggccttcaagccgctgaacgaagcccag
gccatggccgcgctggataaactcaaggcgtccagctacagcatcgtcaagcgtgaagac
aagccgaccagcagcaagccgtcggcgccgttcatcacctccaccctgcaacaggctgcg
agcaaccgcctgggctttggcgtgaagaagaccatgatgatggcgcagcgcttgtacgaa
gccggctacatcacctatatgcgtaccgactccaccaacctgtcggtggacgcggtcgcc
atggcgcgtacttatatcgagagcgaattcggcaagaagtacctgccggagaagccgaac
gtctacagcagcaaggaaggcgcacaggaggctcacgaagcgattcgtccttccgacgcc
aacaccgagccaagcaagctcagtggcatggagcgcgacgctgagcgcctctacgagctg
atctggcgccagttcctggcttgccagatgctgccggcgcaatacctgtccaccaccgtg
agcgtgggcgcaggcgacttcgagttgcgtgccaagggccgcatcctcaagttcgacggc
tacacccgtgtgatgccgcagatcgccaagcctggcgatgatgacgtgctgccggacatg
gcccagggcgatacgttgaagctgatcaagctcgacccgtcccagcacttcaccaagccg
ccggcgcgttactccgaagccagcctggtcaaagagatggaaaaacgcggtatcggtcgg
ccctcgacctacgcggcgatcatctccaccatccaggaccgcggctacgtggcgctgcac
aaccgtcgcttctattcggaaaagatgggcgacatcgtcaccgagcgcctgtccgagagc
ttctccaacctgatggactacggcttcaccgccggcatggaagagaacctcgatgacgtc
gcccagggcgagcgtgactggaaaaacgtgctggacgagttctacggcgacttcaagaag
aaactcgaagtggccgaaagccctgagagcggcatgcgcgccaaccagccagtgatgact
gatatcccgtgcctgacctgcggccgtccgatgcagattcgcaccgcgtccaccggcgtg
ttcctcggttgctcgggctacagcctgccgccgaaagaacgctgcaaggccacggtcaac
ctggtgccgggcgatgaaatcgccgcggacgacgagggtgaatccgagtcgctggtactg
cgtggcaagcaccgctgcccgatctgcagcacggcgatggacgcctacctgctcgatgag
aagcacaagttgcacatctgcggtaacaacccggattgcgacggctacgagatcgaagag
ggcagctaccgcatcaagggctatgaaggtccaagcctggaatgcgacaagtgcggcagc
gagatgcagctcaagaccggccgtttcggcaagttcttcggttgcaccaacccgacgtgc
aagaacacccgcaaactgctgaaaagcggtgacgcagcgccgccgaagatggacccggtg
aagatgcctgaactcaagtgcgagaaggtcaacgacacctatatcctgcgtgacggcgct
tcggggttgttcctggcggccagccagttcccgaaaaaccgcgagacccgtgcaccgctg
gtgctggaaatcgtgccgcacaaggacgagatcgatccgaagtaccacttcctgtgcgaa
gcgccgaagaaggacccggacggtcgcccggccgtgatccgctacagccgcaagaccaag
gagcagtacgtgcagtccgaagtggacggcaagcctaccggctggaaagcgttctacgac
ggcggcaagtggaaggtcgaggacaagcgccagggcgcttga
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