Pseudomonas lurida: A7318_13035
Help
Entry
A7318_13035 CDS
T04730
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfx
Pseudomonas lurida
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfx03032
]
A7318_13035
03400 DNA repair and recombination proteins [BR:
pfx03400
]
A7318_13035
Enzymes [BR:
pfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A7318_13035
DNA replication proteins [BR:
pfx03032
]
Prokaryotic type
DNA Topoisomerases
A7318_13035
DNA repair and recombination proteins [BR:
pfx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A7318_13035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AOE79486
LinkDB
All DBs
Position
complement(2906898..2907935)
Genome browser
AA seq
345 aa
AA seq
DB search
MSDSALPRDLHYVDDTQPGIRRKTVRGKFHYFDPKGVRITDADEIKRLNALAVPPAYTDV
WICADPSGHLQATGRDARGRKQYRYHARWREVRDSDKYARLQEFGNALPKLRKQLEAQIA
EPGFTREKVLATVVMLLDATLIRVGNTQYARDNKSYGLTTLRTRHVDVKGSEIQFQFRGK
SGVEHQISVKDRRLATVVKRCLELPGQNLFQYLDEDGERHTVSSHDVNEYLHSLTGADFT
AKDYRTWAGTAMALAVLRELEWQPESDAKRHVVAMVKDVAKQLGNTPAVCRKCYIHPAVL
EHFSLGELSRLPKPRIRKGLKAEEVALAMFLEQLAADLPKKTKAG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactctgcgctaccccgtgacctgcattacgttgacgacacccagcctggcatc
cgtcgcaagacggtgcgcggcaagttccactacttcgaccccaagggcgtacgcatcact
gatgcggatgagatcaagcgccttaacgccctggcggtccctccggcctataccgacgtg
tggatctgcgccgacccgagcggccacctgcaagccaccggccgcgatgcccgtgggcgc
aagcagtaccgctaccacgcgcgctggcgcgaggtgcgcgacagcgacaagtacgctcgg
ctgcaggaattcggcaacgccctgccgaaactgcgcaaacagttggaagcgcaaatcgcc
gaacccggcttcacccgcgaaaaggtgctggccacggtggtgatgctgctggatgcgacg
ctgatccgcgtcggcaacacccaatatgcgcgggacaacaagtcctacgggctgaccacg
ttgcgcacccgccatgtggacgtgaaaggcagcgagatccagttccagttccgtggcaag
agtggcgtcgagcatcagatcagcgtcaaggaccggcgcctggccaccgtggtcaagcgc
tgcctggaattgccggggcagaacctgttccagtacctggacgaggacggcgaacggcac
accgtcagctcccatgacgtgaatgaatacctgcacagccttaccggtgcggatttcacc
gccaaggactaccgcacctgggccggcaccgccatggcgctggcagtgttgcgggagttg
gagtggcaacctgagtccgatgccaagcgccacgtcgtggccatggtcaaggatgtcgcc
aagcaactgggtaacaccccggcggtgtgtcgcaaatgctacatccaccccgccgtgctg
gagcatttcagcctgggtgaactctccaggctacccaagccgaggatacgcaaagggctc
aaggccgaagaggtggccttggcgatgttccttgaacaacttgcggcggacttgccgaaa
aaaaccaaggcgggttag
DBGET
integrated database retrieval system
