Pseudomonas lurida: A7318_13620
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Entry
A7318_13620 CDS
T04730
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pfx
Pseudomonas lurida
Pathway
pfx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A7318_13620
09124 Replication and repair
03420 Nucleotide excision repair
A7318_13620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfx03021
]
A7318_13620
03036 Chromosome and associated proteins [BR:
pfx03036
]
A7318_13620
03400 DNA repair and recombination proteins [BR:
pfx03400
]
A7318_13620
Enzymes [BR:
pfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
A7318_13620
Transcription machinery [BR:
pfx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A7318_13620
Chromosome and associated proteins [BR:
pfx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
A7318_13620
DNA repair and recombination proteins [BR:
pfx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A7318_13620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOE79596
LinkDB
All DBs
Position
complement(3034811..3037066)
Genome browser
AA seq
751 aa
AA seq
DB search
MSYSVAVRALCEFTAKVGDLDLRFTPSPSAQEGIVGHRTVASRRSQHYQNEVALEGEYQQ
LKVRGRADGYDPDANRLEEVKTYRGDLDAQPTNHRQLHWAQVKVYGWLMCQKLGLPEIDL
ALVYFDIVGEGETVLNQRFQATELEPFFNQQCALFLGWAQQEMAHREARNSAAQSLVFPH
VGFRAGQRSLAESVYKAVSTGRCLMAQAPTGIGKTIGTIFPLLKALTPQQLDKLFFLTAK
TPGRKLALDAAQVLYASSPHLPLRVLELVARDKACEHLDKACHGDSCPLAKGFYDRLPAA
RIAASKVRLLDQRNLREVALAHDVCPYYLSQEMARWADLVVADYNYYFDFGAMLFGLAQL
NQWRAAVLVDEAHNLVERARSMYSASLDQYHLKTLRDTAPEPLKKPLQRLNREWNALHKD
QLAPYQAYAVRPEKLLLALSMCASSMGEYFNDHPDALSGDLQTFYFDVLQFAKVAELFNE
HFIFDISKRQLSGKRSSSTLCLRNVVPAEFLRPRLTAARSSVLFSATLSPRHYYADLLGL
PADTVWVDVESPFKAEQLQVRIVAEISTRFVHRNASLAPIVELIARQYTQQPGNYLAFFS
SFDYLQQVAQLLAERHPHITLWQQSRGMAEAERQAFLDQFTEHSQGIGFAVLGGAFGEGI
DLPGARLIGAFIATLGLPQLNPVNEQMKLRMGAIFGAGYDYTYLYPGLQKVVQAAGRVIR
SQQDRGVVVLIDDRFGEARVRQLLPRWWAVA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
ttgagctacagcgttgccgtgcgtgcactgtgtgagttcacggccaaggtcggtgacctg
gacctgcgcttcacgccgtcgcccagcgcccaggaaggcattgtcggccaccgcaccgtc
gcctcgcggcgcagccagcactaccagaatgaagtggcactcgaaggtgagtaccagcaa
ctcaaagtgcggggcagggcagacggctacgacccggacgccaaccgcctggaagaagtg
aaaacctatcgcggcgaccttgatgcgcagcccaccaaccaccggcaattgcattgggcc
caggtcaaagtctatggctggttgatgtgccagaagcttggcctgcctgagatcgacctg
gcgctggtgtacttcgatatcgtcggcgaaggcgaaacggtgctcaaccaacgctttcaa
gccaccgagctggaaccgttcttcaaccagcaatgcgcacttttcctcggttgggcccaa
caggaaatggcgcaccgtgaagcgcgcaacagcgccgcgcaaagcctggtgttcccccac
gtcggtttccgtgccggccagcgttcccttgccgaatcggtgtacaaggccgtcagcact
ggccgttgcttgatggcccaggcaccgacgggcatcggcaagaccatcggcacgattttc
cctttgctcaaggccctgacgccccagcaactggacaagctgtttttcctcaccgccaag
acgcccggccgcaagctcgccctggatgccgcccaagtgctgtatgccagcagtccccac
ctgcctctgcgcgtgctggagctggtggcgcgagacaaagcctgcgaacacttggacaaa
gcctgtcacggcgattcctgccccttggccaagggcttctacgaccggttgcccgctgcg
cgtatcgccgcgtcgaaggtgcgcctgctggaccagcgcaacctgcgcgaggtggcgctg
gcccatgacgtctgcccctattacctgagccaggaaatggcgcgctgggccgacctggtg
gtcgccgactacaactactatttcgactttggcgccatgctgttcggcctggcacagctc
aaccagtggcgcgcggccgtgctggtggacgaggcgcacaacctggtcgagcgcgcccgc
tccatgtacagcgccagcctggaccagtaccacctcaagaccctgcgtgacaccgcgccc
gagcccttgaagaaacccttgcagcgcctcaaccgtgagtggaacgcgctgcacaaggac
caacttgcgccgtaccaggcctatgccgtgcgaccggaaaaactgctgctggccctgagc
atgtgtgccagcagcatgggcgagtatttcaatgaccatcccgacgcgctcagtggcgac
ctgcaaaccttctattttgacgtgctgcaatttgccaaggtcgccgagctgttcaacgaa
cacttcattttcgacatcagcaagcgccagctcagcggcaaacgcagcagttctaccctg
tgcctgcgcaacgtggtgcccgctgagtttctccgcccacggttgactgcggcccgcagc
agcgtgttgttctccgcgaccctgagcccgcggcattactacgccgacctgctgggcttg
ccggcggacacggtgtgggtcgatgtggagtcgccgttcaaggccgagcaattgcaggtg
cgtatcgtcgctgaaatctccacgcgttttgtccatcgcaacgcctcgctggcccccatc
gttgagctgatcgcccgccagtacacgcagcagcctggcaattacctggcatttttctca
agctttgattacctgcagcaggtggcgcaactgctggccgagcggcatccgcacatcacc
ctgtggcagcagtcgcgtggcatggccgaggccgagcgccaggcgttcctcgaccaattc
accgaacacagccagggcatcggttttgccgtgctcggcggcgccttcggcgaaggcatc
gacctgcccggcgcccgcttgatcggcgccttcatcgccacgctcgggttgccccaactc
aacccggtcaacgagcagatgaaactgcgcatgggcgctatcttcggcgcgggctatgac
tacacctacctgtaccccggcctgcagaaagtggtgcaggccgcgggcagggtgatccgc
agccagcaggaccgtggcgtggtggtgttgatcgacgaccgtttcggcgaggcgcgggta
cgtcagttgttgccccgctggtgggcggttgcatga
DBGET
integrated database retrieval system
