Pseudomonas lurida: A7318_14400
Help
Entry
A7318_14400 CDS
T04730
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pfx
Pseudomonas lurida
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfx01002
]
A7318_14400
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfx01011
]
A7318_14400
Peptidases and inhibitors [BR:
pfx01002
]
Cysteine peptidases
Family C82
A7318_14400
Peptidoglycan biosynthesis and degradation proteins [BR:
pfx01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
A7318_14400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AOE79744
UniProt:
A0A5E6NY49
LinkDB
All DBs
Position
3233402..3234997
Genome browser
AA seq
531 aa
AA seq
DB search
MFKKHACYLSICLLVAPLVATADALPVEPLPVTTPAPVELAPVQQALAQLPSVCPSLAPL
IDAAALSRLQAFYQQQGNTPLWSGDERRQALHAQLLLLADDGLDPTHYSLPAVDATANVL
CSDIDTSQHYLQALQDLHYGRLQQSRFEPLWHSQPPTRDPNVEVLAFAATGLQDMAQAFD
QARPSADLYRSLRNAYSTVRQQPLPHWDPVATGPLLRPGMEDPRVPELARRLISGGYLAK
APSGKQYRDELVKAVKAFQLSHSLQADGVIGAGTVAELNISPAVRREQLRINLERFRWLA
QDLEPEGVLVNVAAAQLSVYQSGIPVWQTRLQVGRAERQTPLLKSRITRLTLNPTWTIPP
TIMREDKLPAIRLNPEYLRQQNLQVLDAEGHPLAPEQVDWARPGNILLRQEAGPRNPLGK
IVMRFPNPYSVYLHDTPSQPLFTKGPRAFSSGCVRVEQPLLLRDLLVSPAERARTDELLA
TGVTHEFRLATPVPVLLGYWTVEVDRQGGLVYAPDIYGRDLVLMKAMGSVL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaaacacgcatgttacttgagcatttgcctgctcgttgcaccattggtcgcg
acagccgatgcgctgccggtcgagccgttgccggtgacaaccccggctccggttgaactg
gcaccggtacaacaggccctggcgcaactccccagcgtgtgccccagcctggcaccgctg
atcgatgcggccgccctgtcgcgcctgcaagccttctaccagcaacagggcaacacgccc
ctgtggtctggcgatgaacgccgccaagccctgcacgctcagttgctgctgctcgccgat
gacggcctggaccccacccactatagcctgccggcggtggatgccacggccaacgtgctg
tgcagcgatatcgacaccagccagcactacctgcaagccctgcaggacttgcactatggg
cgcctgcagcaatcgcgcttcgaaccgttgtggcattcccagccgcccacccgcgacccc
aacgttgaagtgctggcctttgccgccaccggcttgcaagacatggcccaggcgttcgac
caggcacgccccagcgccgatttataccgtagcctgcgcaatgcctactccactgtgcgc
caacagccgctgccccattgggacccggtcgccaccggccctctgttgcgccccggcatg
gaagacccgcgcgtcccggaactggcgcggcggctgatcagtggtggttacctggccaag
gcgcccagcggcaagcaataccgcgatgaactggtcaaggcggtcaaggcgttccagctc
agccattcactgcaagccgacggcgtgatcggtgccggcacggtggccgagctcaatatc
agcccggcggttcgccgcgagcaactgcgcatcaaccttgaacgtttccgctggctggcc
caggacctggaacccgaaggcgtgctggtcaacgttgccgctgcgcaactgagcgtgtac
cagagcggcatccccgtgtggcaaacccgcctgcaagtcggccgcgccgaacgccagacg
ccgttgctcaaatcgcgcatcacccggctgacgctcaaccccacctggaccatcccgccc
accatcatgcgcgaggacaaactcccggccatccgcctcaaccccgaatacctgcgccag
caaaacctgcaagtgctcgacgccgagggccatccgctggcgccggaacaggtcgactgg
gcgcgccccggcaatatcctgctgcgccaggaagccggcccgcgcaacccgctgggcaag
atcgtgatgcgctttcccaacccgtactcggtgtacctgcacgacacgccgagccagccg
ctgttcaccaaggggccgcgggcgttcagctcgggctgtgtgagggtcgagcaacccttg
ttgctgcgggacctgctggtgagcccggccgaacgcgcccgtaccgatgaattgctggcc
accggcgtcacccatgaattcaggctggccacgccggtgccggtgctgttgggctactgg
acggtcgaggtcgaccgccagggcggcttggtgtacgcgccggatatctacgggcgcgac
ctggtgttgatgaaagcgatgggcagtgtgctttga
DBGET
integrated database retrieval system
