Pseudomonas lurida: A7318_19355
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Entry
A7318_19355 CDS
T04730
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pfx
Pseudomonas lurida
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfx03009
]
A7318_19355
Enzymes [BR:
pfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7318_19355
Ribosome biogenesis [BR:
pfx03009
]
Prokaryotic type
rRNA helicases
A7318_19355
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
AOE80653
UniProt:
A0A5E6Q2E9
LinkDB
All DBs
Position
complement(4289445..4290791)
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AA seq
448 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILH
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVGECVNRQQTM
LFSATTGGSTLREMVAKVLNNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWLLAN
ETYQKAIVFTNTRAAADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKAGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYTGPKKVKASGKAVGVKKKKTDAKGDKKKTGAKSPTKRKIANR
PKTDNLSLVSKDGMAPLKRRKPEAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaaattt
gtcgagcctacgcctgtgcaagcagcggccatcccgctcgcgctcgaagggcgtgacctg
cgggtgacggctcaaaccggtagcggcaagaccgccgctttcgtcctgccgatcctgcat
cgcttgatcggcccggccaaagtccgcgtgagcatcaagaccctgatcctgctgccaacc
cgcgagctcgcccagcagaccctgaaggaagtggagcgtttctcgcagttcaccttcatc
aagtccggcctgatcaccggtggcgaagacttcaaggtccaggctgccatgctgcgcaag
gtgccggacattctgatcggcaccccgggccgcatgatcgagcagctcaacgccggcaac
ctcgacctcaaggaagtcgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
ggctttgccgacgacgtacagcgcctggtgggcgaatgcgtcaaccgccagcagaccatg
ctgttctccgccaccaccggcggttcgaccttgcgtgagatggtcgccaaggtgctgaac
aaccctgagcacctgcaggtcaacaacgtcagcgacctcaacgcgacgacgcgccagcag
atcgtcaccgctgaccacaatgtgcacaaagagcagatcctcaattggctgctggccaac
gagacctatcagaaagccatcgtattcaccaacacccgcgctgccgccgaccgcatctac
ggtcgcctggtcgcccaggaatacaaggcgttcgtgctgcacggcgagaaagaccagaag
gatcgcaaactggccatcgaccgcctcaaggctggcggcgtgaagatcctcgtggctacc
gacgttgccgcgcgcggcctggacgtggatggcctggacctggtgatcaacttcgacatg
ccgcgcagtggcgacgaatacgtacaccgtatcggccgtaccgggcgtgccggcaatgat
ggcctggccatctcgctgatttgccacggtgactggaacctgatgtcgagcatcgagcgc
tacctcaagcagtcgttcgagcgtcgcaccatcaaggaagtcaaaggcacctacaccggg
ccgaagaaggtcaaggcgtcgggcaaggctgtcggcgtgaagaagaaaaagactgacgcc
aagggcgacaagaagaagaccggggccaagtcaccgaccaagcgcaagatcgccaaccgt
ccgaagaccgacaacctgtcgctcgtcagcaaggacggcatggcgccactcaagcgccgc
aagccggaagcgccagcggctgaataa
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