Pseudomonas lurida: A7318_19595
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Entry
A7318_19595 CDS
T04730
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pfx
Pseudomonas lurida
Pathway
pfx03030
DNA replication
pfx03430
Mismatch repair
pfx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7318_19595
03430 Mismatch repair
A7318_19595
03440 Homologous recombination
A7318_19595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfx03032
]
A7318_19595
03400 DNA repair and recombination proteins [BR:
pfx03400
]
A7318_19595
Enzymes [BR:
pfx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A7318_19595
DNA replication proteins [BR:
pfx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A7318_19595
DNA repair and recombination proteins [BR:
pfx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A7318_19595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_30
TIP49
AAA_18
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
AAA_7
HasA
Rad17
SKI
Mg_chelatase
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AOE80699
LinkDB
All DBs
Position
complement(4339745..4341799)
Genome browser
AA seq
684 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLHALIEGDAKALLEAVRHLSEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADATDAPRQPLKPVGISQATVDSAKPVAGAAVAAPVAAAPTPVAALAEPEPVAAAPVVEP
EPASEPEPVVDLPWNDPVEADVDVELAPAVEPVLETSGEQPELTPMPTPTPDSVVPDAPE
WVSAPVPEPTVAQVEAATPGIDLDDEPPLDEDYIEPDMDSAYSYLDDLASEHTAEPAPEP
EAEPAAAPATGLALQWLELFPKLPISGMTGSIAANCTLISIEGDHWLLHLDPAHSALFNA
TQQRRLNDALNQYHERPLTITIELIKPEQETPAQAATRRRINRQREAEDSIQGDPLIQQM
MQQFGAVVRHDTIEPVEAPVPQAS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccaacggctgcaccatgcc
tacctgttcaccggtacccggggcgtgggcaagaccaccattgcgcgcatcatcgccaaa
tgcctgaactgtgaaaccggtatcacgtcgacgccgtgcggcacctgctcggtgtgcaag
gaaatcgacgaagggcgctttgtcgacctgatcgaaatcgacgccgcgagccgcaccaag
gtcgaagacactcgcgagctgctcgacaacgtgcaatacgcgcccagccgtggccgcttc
aaggtctacctgatcgacgaagtgcacatgttgtcgagccattccttcaacgccttgttg
aaaaccctggaagagccgccgccctacgtcaaattcatcctggccaccactgatccgcaa
aaacttcctgcaacgattctgtcgcggtgcctgcagttttccctgaaaaacatgaccccc
gagcgggttgtcgagcatttgacccacgtgctgggtgtcgagaacgtaccgttcgaagac
gacgcactgtggttgctcggccgcgccgccgatggctcgatgcgtgatgccatgagcctc
accgaccaggccatcgcctttggtgaaggcaaggtcatggccgccgacgtgcgcgccatg
ctcgggaccctggaccacggccaggtgttcgacgtgttgcacgcgctgatcgaaggcgac
gccaaggcgttgcttgaagccgtgcgtcacctgtcggagcaaggcccggactggaatggc
gtgctctcggaaatcctcaatgtgctgcaccgcgttgctatcgcccaggccctgcctgaa
ggggtcgacaacggccatggcgaccgcgaccgcgtgctggccctggcgcaggcgttgccg
gccgaagatgtgcagttctactaccagatgggcctgattggtcgccgcgacctgcccctg
gcgcccgacccgcgcgggggcttcgaaatggtgctgctgcgaatgctggccttccggccc
gccgacgcgaccgatgcgccgagacagccgctaaagccagtggggatcagccaggccaca
gttgattccgccaaaccagtggctggcgcggcagtggctgcgccagtggcggctgcgccg
acgcctgtcgctgcgctggctgagcctgagcctgtcgctgctgcgccagtggtcgagcct
gagccagcgagtgagcctgagccggtcgtcgacctgccctggaatgatccggtagaggcg
gacgtcgacgtcgagttggcgccggccgtggagcctgtgctggaaaccagcggtgagcag
cccgaactgacgccgatgcccacgccgaccccggacagcgtagtgccggatgctcccgag
tgggtgtctgcaccggttcccgagcccaccgtggctcaggtggaagccgccacgccgggt
atcgacctcgacgacgaaccgccgctggacgaagactacatcgagccggacatggattcc
gcctacagctacctggacgacctggccagcgaacacaccgccgaaccggcccccgagccc
gaggcggaacccgctgcagccccggccaccggcctggccctgcaatggctggagctgttc
cccaaattgccgatttccggcatgaccggcagcatcgccgccaactgcacactgatctcc
atcgagggcgaccactggctgttgcacctggacccggcccacagcgccctgttcaacgcc
acccagcagcgccgcctcaacgatgcgcttaaccagtaccatgagcgcccgctgaccatc
accatcgagctgatcaagcccgagcaggaaaccccggcccaggccgcgacccgtcgacgt
atcaaccgtcagcgtgaggccgaggattcgatccagggtgatccgctcatccagcaaatg
atgcaacagttcggtgcggtcgtccgtcacgatactattgaacctgtcgaagccccggtg
ccccaggcgtcatga
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