Pseudomonas lurida: A7318_22355
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Entry
A7318_22355 CDS
T04730
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfx
Pseudomonas lurida
Pathway
pfx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7318_22355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfx03019
]
A7318_22355
03110 Chaperones and folding catalysts [BR:
pfx03110
]
A7318_22355
03029 Mitochondrial biogenesis [BR:
pfx03029
]
A7318_22355
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfx04147
]
A7318_22355
Enzymes [BR:
pfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A7318_22355
Messenger RNA biogenesis [BR:
pfx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A7318_22355
Chaperones and folding catalysts [BR:
pfx03110
]
Heat shock proteins
HSP60 / Chaperonin
A7318_22355
Mitochondrial biogenesis [BR:
pfx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A7318_22355
Exosome [BR:
pfx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A7318_22355
Exosomal proteins of other body fluids (saliva and urine)
A7318_22355
Exosomal proteins of breast cancer cells
A7318_22355
Exosomal proteins of colorectal cancer cells
A7318_22355
Exosomal proteins of bladder cancer cells
A7318_22355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CCDC73
Motif
Other DBs
NCBI-ProteinID:
AOE81227
LinkDB
All DBs
Position
4922404..4924050
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGDSARKKMLTGVNILADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELEDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAVVAELKNLSKPCADTKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
TGLENELSVVEGMQFDRGYLSPYFVNKPETMVAELESPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVSEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESATLENLGSAKRVTISKENTIIVDGAGVDGDIQSRINQIRAQVAETSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALEALVDLKGDNADQNVGIAVLRRAVESPLRQIASNSGDEPSVVVNEVKNGKGNYGYNA
ATSEYGDMVEMGILDPTKVTRSALQAAASIAGLLLTTEVAIADKPKAEGSAGGGMPDMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctcaccggtgtc
aacatcctggctgacgcagtaaaagcgaccctgggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgtcgccaaagaaatc
gaactggaagaccgtttcgagaacatgggcgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgacgcaggcgacggcaccaccacggctaccgtcctggctcagtcgatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggcgaccattgccgttgttgccgagctgaaaaacctgtccaagccatgcgctgac
accaaggctatcgctcaggtaggcaccatctccgccaactccgacagctccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
actggcctggaaaacgaactgtcggttgtagaaggcatgcagttcgaccgcggctacctg
tccccgtacttcgtcaacaagccagaaaccatggttgccgagctggaaagcccgctgatc
ctgctggtcgacaaaaagatctcgaacatccgcgaaatgctgccagtcctggaagccgtt
gccaaagccggccgcccactgctgatcgtttccgaagacgttgaaggcgaagccctggcg
accctggttgtgaacaacatgcgtggcatcgttaaagtcgcagccgtcaaggctccaggc
ttcggcgaccgtcgcaaggccatgctgcaggacatcgccgtattgaccggcggtaccgtc
atctccgaagagatcggcctgagcctggaaagcgccaccctggaaaacctgggcagcgcc
aagcgcgtgaccatctccaaggaaaacaccatcatcgttgacggtgctggcgttgacggc
gacattcagtcgcgcatcaaccagatccgcgcccaggttgccgagacttcctcggactac
gaccgtgaaaaactgcaagagcgcctggccaagctgtccggcggcgtagccgttatcaag
gttggcgctggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgcgcagccgtcgaagaaggcgtggtacctggcggtggcgttgcactgatc
cgtgccctggaagccctggttgacctcaaaggcgacaatgctgaccagaacgtcggtatc
gctgttctgcgtcgcgccgttgaatccccactgcgccagatcgcttccaacagcggcgac
gagccaagtgttgtggtcaacgaagtgaagaacggcaaaggtaactacggttacaacgct
gccacttccgaatacggtgacatggttgagatgggtatcctggacccaaccaaagtgacc
cgttcggcgttgcaagcagccgcttctatcgctggtctgttgctgaccaccgaagtggcg
attgctgacaagccgaaggctgaaggctcggctggcggcggtatgccagacatgggcggc
atgggtggcatgggcggcatgatgtaa
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