Pseudomonas lurida: A7318_22565
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Entry
A7318_22565 CDS
T04730
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
pfx
Pseudomonas lurida
Pathway
pfx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A7318_22565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfx03400
]
A7318_22565
Enzymes [BR:
pfx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
A7318_22565
DNA repair and recombination proteins [BR:
pfx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A7318_22565
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A7318_22565
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A7318_22565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
TPR_25
Motif
Other DBs
NCBI-ProteinID:
AOE81269
UniProt:
A0A5E6QYN3
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All DBs
Position
4972153..4973580
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AA seq
475 aa
AA seq
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MTSIFWYDYETTGINPRNDRPLQVAGIRTDVELNEIGTPVNLFCQPSDDILPHPVACAIT
GITPAILAEKGLAEADFMTRVHAELAAPGTCGAGYNTLRFDDEMTRYSLYRNFFDPYARE
WQGGNSRWDLIDVVRTAYALRPEGIEWPQQDGRVTLKLERLTEANGIAHGQAHDALSDVR
ATIALARRVREKQPKLYEWLFQLRSKQRVMDQVRLLQPMVHISGRFSAERHYLGVVLPLA
WHPRNRNALIVCDLGLDPQGLLDLDADALRQRLYTRRDDLAEGELPVPLKLVHINRCPVV
APLNVLRAQDRERLHLDMAIYQERALRLTDAQELWRDKLAVIYAEEDFAASADPEQQLYD
GFIGDRDRRLCEQVRTAEPAQLARQQWPFDDHRLPELLFRYRARNFPDTLNSDEQLRWKL
FCQQRLSNPEWGAPNTLEAFNQARQEFAVSATPFQHGVLEQWQEYADTLAARMNL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccattttctggtacgactatgaaaccaccggcatcaacccgcgcaacgatcgc
ccactccaggtagccggtattcgcacggacgtcgaactcaatgagatcggcacgccggtc
aatcttttttgccagcccagcgacgatatcctgcctcacccggtggcctgcgcgattact
ggtatcacccctgcgatactcgcggaaaagggccttgccgaggccgacttcatgacccgt
gtgcatgctgaactggccgctccgggaacgtgtggcgccgggtacaacaccttgcgcttt
gacgatgaaatgacgcgctacagcctgtatcgcaatttcttcgacccttatgcgcgggaa
tggcagggcggtaacagtcgctgggatttgatcgatgtggtgcgtactgcctacgcgttg
cgcccggagggcattgaatggccgcagcaggatgggcgcgtcacgctcaagctggagcgc
ctgaccgaagccaacggtatcgcccatggccaggcccacgatgcgttgtccgatgtgcgc
gccacgatcgccttggcccgacgggttcgcgagaaacaacccaagctatatgagtggctg
tttcagctacgcagcaaacaacgcgtgatggaccaggtgcgcttgttgcagccgatggtg
cacatctccgggcgcttttccgccgagcgtcattacctgggggttgtgctgccgctggcg
tggcacccgcgcaatcgcaatgccttgatcgtctgcgacctcgggctcgatccgcaaggg
ctgctggacctggatgcagatgccttgcgccaacgcctttacacccgccgcgacgatctg
gccgagggcgaactgccggtgccgctcaaattggtgcatatcaatcgttgccccgtggtc
gctcccttgaatgtgctgagggcacaagaccgtgaacgcctgcacttggacatggctatt
tatcaggagcgggcactgcggctaactgacgcacaggaactttggcgcgataagttagcg
gtcatttatgccgaagaagatttcgcggcgagcgccgacccggaacagcagctttacgac
ggttttatcggagaccgtgatcgacgtttatgcgaacaagtccggacggccgagcctgcg
caattagcacgccagcagtggccttttgatgatcaccgtttgcctgaattattgtttcgc
taccgcgcgcgtaacttccccgacaccttgaacagcgacgaacaactacgctggaaactt
ttttgtcagcaacgtttgtcgaacccggagtggggcgcgccgaatacccttgaggcattt
aatcaggcccggcaggagttcgccgttagtgccacgccgtttcagcatggggtgctggag
caatggcaggaatatgcggacactctggccgcgcggatgaatttgtag
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