Pseudomonas lurida: A7318_23305
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Entry
A7318_23305 CDS
T04730
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfx
Pseudomonas lurida
Pathway
pfx00260
Glycine, serine and threonine metabolism
pfx00460
Cyanoamino acid metabolism
pfx00630
Glyoxylate and dicarboxylate metabolism
pfx00670
One carbon pool by folate
pfx00680
Methane metabolism
pfx01100
Metabolic pathways
pfx01110
Biosynthesis of secondary metabolites
pfx01120
Microbial metabolism in diverse environments
pfx01200
Carbon metabolism
pfx01230
Biosynthesis of amino acids
pfx01240
Biosynthesis of cofactors
pfx04981
Folate transport and metabolism
Module
pfx_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A7318_23305 (glyA)
09102 Energy metabolism
00680 Methane metabolism
A7318_23305 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A7318_23305 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A7318_23305 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A7318_23305 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
A7318_23305 (glyA)
Enzymes [BR:
pfx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A7318_23305 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AOE81406
UniProt:
A0A5E7CJG8
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All DBs
Position
5149415..5150668
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAVRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPYADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKTYQQQVVKNAQTMASV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctcttcgccgccatggag
caagaagccgtgcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cctgcggtgatggaggctcaaggttcggttctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggttgcgagtacgtcgacgtggttgagcaactggccatcgac
cgtgcaaaagaactgttcggcgccgattacgccaacgtccagccacacgccggctcccaa
gccaacagcgccgtgtacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccgttcaatacggtatcgatgccaacggcctgatcgactacgacgaagtcgagcgc
ctggcggtcgagcacaagccaaaaatgatcgtggccggtttctctgcctactcgcagatc
ctggacttcccacgctttcgcgctatcgccgacaaggttggcgcctacctgttcgtcgac
atggctcacgtagcaggcctggtcgctgctggcgtctacccgaacccggtgccttacgct
gacgtggtgaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatcctg
gcgcgcgccaacgccgagatcgagaaaaagctgaactccgctgtattcccgggcgcccaa
ggtggcccgctggagcacgtgatcgccgccaaggcgatctgcttcaaggaagcgctgcag
cctgagttcaagacttaccagcaacaagtggtgaaaaacgcccagaccatggccagcgtg
tttatcgaacgcggcttcgacgtggtatccggcggtactgagaaccacctgttcctgctg
tcgctgatcaagcaggacatttccggtaaggatgctgacgctgccttgggcaaagccttc
atcaccgtgaacaagaactccgtgccgaacgacccacgttcgccgttcgtcacctccggc
ctgcgcttcggcaccccggctgtgaccacccgtggtttcaaggaagcggagtgcaaggaa
ctggctggctggatctgcgacatcctggcagacctgaacaacgaagccgtgatcgacgcg
gtacgtgagaaggtcaaggccatctgcaaaaagctgccggtatacggcgcttga
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