Pseudomonas lurida: A7318_23505
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Entry
A7318_23505 CDS
T04730
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pfx
Pseudomonas lurida
Pathway
pfx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A7318_23505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfx03021
]
A7318_23505
03400 DNA repair and recombination proteins [BR:
pfx03400
]
A7318_23505
Enzymes [BR:
pfx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A7318_23505
Transcription machinery [BR:
pfx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A7318_23505
DNA repair and recombination proteins [BR:
pfx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A7318_23505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
7TMR-HDED
IniB
Motif
Other DBs
NCBI-ProteinID:
AOE81442
LinkDB
All DBs
Position
5188494..5192567
Genome browser
AA seq
1357 aa
AA seq
DB search
MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGATKDQFRDVGLHAAFKSV
FPIISYSGNAALEYVGYRLGEPAFDVKECVLRGVTYAVPLRVKVRLIIFDKESSNKAIKD
IKEQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARI
IPYRGSWLDFEFDPKDCVFVRIDRRRKLPASVLLRALGYTTEQVLDAFYTTNVFSLKDET
LKLELIASRLRGEIAVLDIQDEKGKVIVEAGRRITARHINQIEKAGIKELEVPLDYVLGR
TTAKVIVHPATGEILAECNTELNTEILAKIAKAQVVRIETLYTNDIDCGPFISDTLKIDS
TSNQLEALVEIYRMMRPGEPPTKDAAETLFNNLFFSPERYDLSAVGRMKFNRRIGRTEIE
GSGVLCKEDIVAVLKTLVDIRNGKGIVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGP
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAAYARTNQYGFLESPYRVVK
DALVTDEIVFLSAIEEADHVIAQASATMNDKKVLIDELVAVRHLNEFTVKAPEDVTLMDV
SPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSGVC
VVARRGGVIDSVDASRIVVRVADDEVETGEAGVDIYNLTKYTRSNQNTCINQRPLVSKGD
RVQRSDIMADGPSTDMGELALGQNMRIAFMAWNGFNFEDSICLSERVVQEDRFTTIHIQE
LTCVARDTKLGPEEITADIPNVGEAALNKLDEAGIVYVGAEVGAGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFTRDGVERDARALSIEKTQLDE
IRKDLNEEFRIVEGATFERLRSALVGHKAEGGAGLKKGQDITDEVLDGLEHGQWFKLRMA
EDALNEQLEKAQAYIVDRRRLLDDKFEDKKRKLQQGDDLAPGVLKIVKVYLAIRRRIQPG
DKMAGRHGNKGVVSVIMPVEDMPHDANGTPVDVVLNPLGVPSRMNVGQILETHLGLAAKG
LGEKINRMIEEQRKVADLRKFLHEIYNEIGGRNEELDTFSDQEILDLAKNLRGGVPMATP
VFDGAKESEIKAMLKLADLPESGQMQLFDGRTGNKFERPVTVGYMYMLKLNHLVDDKMHA
RSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMY
KNIVDGDHRMEPGMPESFNVLIKEIRSLGIDIDLETE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcatatactgagaaaaaacgtatccgcaaggactttagcaagttgccggac
gtcatggatgtcccgtaccttctggctatccagctggattcgtatcgtgaattcttgcag
gcgggagcgaccaaagatcagttccgcgacgtgggcctgcatgcggccttcaaatccgtt
ttcccgatcatcagctactccggcaatgctgcgctggagtacgtgggttatcgcctgggc
gaaccggcatttgatgtcaaagaatgcgtgttgcgcggtgttacgtacgccgtacctttg
cgggtaaaagtccgcctgatcattttcgacaaagaatcgtcgaacaaagcgatcaaggac
atcaaagagcaagaagtctacatgggcgaaatcccattgatgactgagaacggtaccttc
gttatcaacggtaccgagcgtgtgatcgtttcccagctgcaccgttccccgggcgtgttc
ttcgaccacgaccgcggcaagacgcacagctccggcaagctcctgtactccgcgcggatc
attccgtaccgtggttcgtggttggacttcgagttcgacccgaaagactgcgtgttcgtg
cgtatcgaccgtcgtcgcaagctgccggcctcggtactgctgcgcgcgctcggctatacc
actgagcaagtgctggacgccttctacaccaccaacgtattcagcctgaaggatgaaacc
ctcaagctggagctgatcgcttcgcgtctgcgtggtgaaattgccgtcctggacatccag
gatgaaaaaggcaaggtcattgttgaagctggccgtcgtatcactgcgcgccacatcaac
cagatcgaaaaagccggtatcaaggaactggaagtgcctctggactacgtcctgggtcgc
actaccgccaaggtcatcgttcacccggctacaggcgaaatcctggctgagtgcaacacc
gagctgaacaccgagatcctggccaaaatcgccaaggcccaggttgttcgtatcgagacc
ctgtacaccaacgacatcgactgcggtccgttcatctccgacacactgaagatcgactcc
accagcaaccaattggaagcgctggtcgagatctatcgcatgatgcgtcctggcgagcca
ccgaccaaagacgctgccgaaaccctgttcaacaacctgttcttcagccctgagcgctat
gacctgtctgcggtcggccggatgaagttcaaccgtcgtatcggtcgtaccgagatcgaa
ggttcgggcgtgttgtgcaaggaagatatcgttgcggtcctgaagaccctggtcgacatc
cgtaacggcaaaggcatcgtcgatgacatcgaccacctgggtaaccgtcgtgttcgctgc
gtaggcgaaatggccgagaaccagttccgcgttggcctggtacgtgttgagcgtgcggtc
aaagagcgtctgtcgatggctgaaagcgaaggcctgatgccgcaagacctgatcaacgcc
aagccagtggctgcggcggtgaaagagttctttggttccagccagctttcccagttcatg
gaccagaacaacccgctctccgagatcacccacaagcgccgtgtatccgcactgggcccg
ggcggtctgacccgtgagcgtgctggctttgaagttcgtgacgtacacccgacgcactat
ggtcgtgtttgcccgatcgaaacgccggaaggtccgaacatcggtctgatcaactccctg
gccgcttatgcgcgcaccaaccagtacggcttcctcgagagcccgtaccgcgtggtgaaa
gacgctctggtcaccgacgagatcgtattcctgtccgccatcgaagaagcagatcacgtg
atcgctcaggcttcggccacgatgaacgacaagaaagtcctgatcgacgaactggtagct
gttcgtcacctgaacgagttcaccgtcaaggcgccggaagacgtcaccttgatggacgtt
tcgccgaagcaggtagtttcggttgcagcgtcgctgatcccgttcctggagcacgatgac
gccaaccgtgcgttgatgggttccaacatgcagcgtcaagctgtacccaccctgcgcgct
gacaagccgctggtaggtaccggcatggagcgtaacgtagctcgtgactccggcgtttgc
gtcgtggctcgtcgtggcggcgtgatcgattccgtggatgctagccgtatcgtggttcgt
gttgccgatgacgaagtagaaactggcgaagccggtgtcgacatctacaacctgaccaaa
tacacccgctcgaaccagaacacctgcattaaccagcgtccgctggtgagcaagggtgat
cgcgttcagcgcagcgacatcatggctgacggcccgtccaccgacatgggtgaactggcg
ctgggtcagaacatgcgcatcgcgttcatggcgtggaacggcttcaacttcgaagactcc
atctgcctgtccgagcgtgttgttcaggaagaccgtttcaccacgatccacattcaggaa
ctgacctgtgtggcccgtgacaccaagcttgggccagaggaaatcactgcagacatcccg
aacgtgggtgaagctgcactgaacaagctggacgaagccggtatcgtttacgtaggtgct
gaagtaggcgcgggcgacatcctggttggtaaggtcactccgaaaggcgagacccagctg
actccggaagagaagctgttgcgcgcgatcttcggtgaaaaagccagcgacgttaaagac
acctccctgcgcgtacctaccggtaccaaaggtactgtcatcgacgtacaggtcttcacc
cgtgacggcgttgagcgtgatgctcgtgcactgtccatcgagaagacccagctcgacgag
atccgcaaggacctcaacgaagagttccgtatcgttgaaggtgcgaccttcgaacgtctg
cgttccgccctggtaggccataaggccgaaggtggcgcaggcctgaagaaaggtcaggac
atcaccgacgaagtcctcgacggtcttgagcacggccagtggttcaaactgcgcatggct
gaagatgctctgaacgagcagctcgagaaggcccaggcctacatcgttgatcgtcgccgt
ctgctggacgacaagttcgaagacaagaagcgcaaactgcagcagggcgatgacctggct
ccaggcgtgctgaaaatcgtcaaggtttacctggcaatccgtcgccgcatccagccaggc
gacaagatggccggtcgtcacggtaacaaaggtgtggtctctgtgatcatgccggttgaa
gacatgccgcacgatgccaatggcaccccggtcgacgtcgtcctcaacccgttgggcgta
ccttcgcgtatgaacgttggtcagatccttgaaacccacctgggcctcgcggccaaaggt
ctgggcgagaagatcaaccgtatgatcgaagagcagcgcaaggtcgcagacctgcgtaag
ttcctgcacgagatctacaacgagatcggcggtcgcaacgaagagctggacaccttctcc
gaccaggaaatcctggacctggcgaagaacctgcgcggcggcgttccgatggctaccccg
gtgttcgacggtgccaaggaaagcgaaatcaaggccatgctgaaactggcagacctgcca
gaaagcggccagatgcagctgttcgacggccgtaccggcaacaagtttgagcgcccggtt
actgttggctacatgtacatgctgaagctgaaccacttggtagacgacaagatgcacgct
cgttctaccggttcgtacagcctggttacccagcagccgctgggtggtaaggctcagttc
ggtggtcagcgtttcggggagatggaggtctgggcactggaagcatacggtgctgcttac
actctgcaagaaatgctcacagtgaagtcggacgatgtgaacggtcggaccaagatgtac
aaaaacatcgtggacggcgatcaccgtatggagccgggcatgcccgagtctttcaacgtg
ttgatcaaagaaattcgttccctcggcatcgatatcgatctggaaaccgaataa
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integrated database retrieval system
