KEGG   Pestalotiopsis fici: PFICI_00578
Entry
PFICI_00578       CDS       T04924                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03020  RNA polymerase
pfy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFICI_00578
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFICI_00578
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfy03021]
    PFICI_00578
   03400 DNA repair and recombination proteins [BR:pfy03400]
    PFICI_00578
Transcription machinery [BR:pfy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PFICI_00578
DNA repair and recombination proteins [BR:pfy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFICI_00578
SSDB
Motif
Pfam: RNA_pol_Rpb4 SidC_lipid-bd
Other DBs
NCBI-GeneID: 19265591
NCBI-ProteinID: XP_007827350
UniProt: W3XLA1
LinkDB
Position
Unknown
AA seq 151 aa
MSNQSNGTRRTNNQQTSRSKPVPAGNEEASSVLNLGEFQDVDTLTLSEASLVINALVNKR
RIEGKDVEKNEMLTKTMDYLDNFARFQKKENVEAVERLLSAHKEFHKFERAQLGTLCCAD
ADEAKTLIPSLTDKISDEDLTELLEEMQKFR
NT seq 456 nt   +upstreamnt  +downstreamnt
atgtccaaccaaagcaacggcactcgccgcacgaataatcaacaaacctcgcgcagcaag
cctgtgcccgctggcaatgaggaggcctcgagcgtgttgaatcttggcgagttccaagat
gttgacaccttgaccctgtccgaggcgtcgctcgtcatcaatgcgctggtcaacaagcgc
cggatagaaggcaaggatgtcgagaagaacgagatgctgaccaagaccatggactacctg
gataactttgcgcggtttcagaagaaggagaatgtggaggcagtcgagcgccttttgagc
gctcacaaggagtttcacaagttcgagcgagcgcagctcggaacattgtgctgcgccgat
gcagatgaggccaagactctcattccatcgctcacagacaagatcagcgatgaagatctg
actgaacttctcgaggaaatgcaaaaattccgctaa

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