KEGG   Pestalotiopsis fici: PFICI_00606
Entry
PFICI_00606       CDS       T04924                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit rpb7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03020  RNA polymerase
pfy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFICI_00606
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFICI_00606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfy03021]
    PFICI_00606
   03019 Messenger RNA biogenesis [BR:pfy03019]
    PFICI_00606
   03400 DNA repair and recombination proteins [BR:pfy03400]
    PFICI_00606
Transcription machinery [BR:pfy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PFICI_00606
Messenger RNA biogenesis [BR:pfy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PFICI_00606
DNA repair and recombination proteins [BR:pfy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFICI_00606
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 19265619
NCBI-ProteinID: XP_007827378
UniProt: W3XL51
LinkDB
Position
Unknown
AA seq 170 aa
MFFLYTLERRVTLHPSYFGKNMHELVTGKLLNDVEGTCTGSYYIITIMDTFDISEGRILP
GSGLAEFTVRYKAVVWRPFKGETIDAIVVSVNQHGFFAEAGPLRIFVSSHLIPSDTKWDP
NATPPEFTNGDDLHIRVGTHVRVKLLGTRAEVGELWAIGSIKEDYLGALE
NT seq 513 nt   +upstreamnt  +downstreamnt
atgttcttcctctataccctcgagcggcgcgtgacgctgcatccgtcctactttggcaag
aacatgcatgagcttgtcacgggcaagttgctgaatgacgtcgagggtacctgtaccgga
agctactatattattaccatcatggacacctttgacatctccgaaggccggattctgcca
ggtagtgggcttgccgagttcactgtgaggtacaaggcggttgtttggcgacccttcaag
ggtgagacgatcgatgctatcgttgtctctgtgaaccagcatggcttcttcgccgaagct
ggtcctctaaggatctttgttagctcgcatttgattccaagcgatacaaagtgggacccc
aatgctacgccccccgagttcaccaacggcgacgacttgcacatcagggtgggaacgcac
gtgcgtgtcaagctgttgggtacccgagctgaggtcggcgagctgtgggccattggcagt
atcaaggaagactatctcggggctctggagtaa

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