Pestalotiopsis fici: PFICI_01381
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Entry
PFICI_01381 CDS
T04924
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PFICI_01381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfy03021
]
PFICI_01381
Enzymes [BR:
pfy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PFICI_01381
Transcription machinery [BR:
pfy03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
PFICI_01381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
DUF7479
Rpr2
DUF321
Motif
Other DBs
NCBI-GeneID:
19266394
NCBI-ProteinID:
XP_007828153
UniProt:
W3XNB8
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MAPAATKTTWDHEYNTLRREKLFREPPKDHSAYPLLQLAVNPHIESFDAIFEPDGLLQRG
LADIGTRVLLDGDDRTSTAGRNRLSIRYKSVQLLKSQVPPSNKFAKKREILPAECRERHA
TYRGKLSATFEYRINGGDPQEFTREIGNLPIMVKSKFCHLRNNTPAQLVANKEESEELGG
YFIVNGNEKIIRLLLMNRRNFPLAIDRPSFANRGPTYTSKGIILRSVRPDETSQTNTLHY
LNDGNITFRFSWRKSEFLVPAMMILKALVETNDREIFEGLVGSPDSKGIQNTFLTDRVEL
LLRTYKAYGIYTKAQTRAYLGEKFRPVLGVSETLSNYEVGTEFLRKIVLVHLGNVHVTEE
QDSDKFRLILLMIRKLYSLVAGDCAVDNPDAVQNQEILLGGFLYGQILKERLDELISGGL
RLSLREYWRRFPGRTFTSQEFQNDFPARIFTKMSENIGNLLEYFLSTGNLSSPSGLDLQQ
VSGFTVVAEKLNFLRFISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCG
LLNHLAHKCKIMTSSVDASAIPALAAELGVVDTSSAATSESVVVMLNGKIIGWCKPAESR
RIADTFRHWKVEGSHGVPLHLEVGFVPASNGGTYPGIFMSSEPARMVRPTKYLPLEQEDF
VGPLEQPYMSIACTESEVVSGESTHVEFDPTNILSILANMTPFSDFNQSPRNMYQCQMGK
QTMGTPGTSLRYRTDNKMYRLQTGQTPIVRSPLHNAYGFDNFPNGTNAVVAVISYTGYDM
DDAMILNKSAHERGFGHGTIYKTKKITLKEENRTKSAKHVTKLFGHAPNTLQKGWERTQL
DEDGLPFVGRCIQEGDILCAWHTVSADYSGNLVNRDGITHYEKYKETEVAFIEEVRVIGS
ETGNEPMQTISIKLRIPRSPVIGDKFSSRHGQKGVASQKWPAVDMPFSESGIQPDVIINP
HAFPSRMTIGMFVESLAGKAGALHGLAQDSTPFRFDEQNTAGDYFGHQLKMAGYNYHGNE
PLYSGITGEELAADIYIGVVYYQRLRHMVNDKYQVRTTGPVVPTTGQPIKGRKRGGGIRV
GEMERDALLAHGTAFLLQDRLMNCSDYSRSWICRKCGSFLSMQPTVSPYVGKKKTVSSVR
CRNCATRIDELEDADLSKVAGEIWEDGQGNQWVGGDQTTLVAVPGALKYLDVELAAMGIK
LKYRVDPKDAARKGPLVQTTWDALEAAGKKAQPALEAAA
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgcagcgacgaagaccacatgggatcacgaatacaacaccctgcgccgagag
aagttgtttcgcgagccacccaaagaccactcggcctacccgctcttgcagcttgccgtc
aacccacacatcgaatcgtttgatgctatcttcgagcctgatggcctgttacaacggggt
ctcgccgacattggcaccagagtcctcctcgatggcgacgacaggacgtcaacagccggc
aggaaccggttgagcattagatacaagagcgtacagctcctcaaatctcaagtcccgcca
agcaacaaatttgcaaaaaagcgagagatcctgcccgccgaatgcagagagagacatgct
acgtaccgtggcaagctctctgctacctttgaataccgaatcaatggtggcgacccgcag
gagttcacccgagaaatcggaaaccttcccatcatggtcaagtccaaattctgccacttg
agaaacaacacacccgctcaattggtcgccaacaaggaggaatcagaagagctgggcggt
tattttatcgtgaatggaaatgagaagatcattcgtcttctcctcatgaacagaaggaat
ttccccctggccattgaccgaccaagtttcgcgaaccgaggaccgacctacacctccaag
ggtatcattctgagatccgtccgaccagacgaaacctcccagacaaatactctgcactac
ctgaacgatggaaacattacctttcgattttcatggagaaagtccgagttcctcgtgccc
gccatgatgattctcaaggctctggtggaaacgaatgatcgggaaatcttcgagggtctc
gtgggctcacccgactcaaagggaatccagaacaccttccttacggatcgagtcgagctc
ctgctgcggacgtacaaggcatatggtatctacaccaaagctcagacaagggcctatctt
ggcgagaaattcaggcctgtcttgggtgtttcagaaactctctcaaactatgaagtggga
accgaatttttgcggaaaatcgtacttgtccatcttggaaatgtacacgttaccgaggaa
caggactctgacaagttccgcctcattcttctcatgatccgcaagctctattcattggtg
gcgggcgattgtgccgttgataaccctgatgcggtccagaatcaggaaattctcctggga
ggtttcctctacggccagattctgaaggaacgcctggatgagctcatttctggcgggttg
cgtctgtcgctacgcgaatactggcgaaggtttcccggtcgcacgtttacatcacaagaa
ttccagaacgacttcccagcacgaatcttcacaaagatgagcgagaacatcggaaacctt
cttgaatacttcctgtctaccggaaacctttccagtccatcgggcttggatctgcaacaa
gtatccggcttcactgttgtggccgagaagctcaactttttgcgtttcatcagccacttc
cgcatggttcacagaggtagcttcttcgctcagctgaagacaaccacggtacgaaaattg
cttccggagtcctggggattcctatgtcctgtccacacacctgatggatctccctgtggt
ttgctcaaccatcttgcccacaagtgtaagatcatgaccagctccgttgatgcgtcagca
atcccggccttggcagctgagctgggagtcgttgacacttcctctgctgccacttctgaa
agtgttgttgtcatgctgaatggaaaaatcatcggctggtgtaagccagcagagtcgagg
agaattgcagacactttccgccactggaaggtggagggttcccatggtgtgccgttgcac
ttggaggttggttttgtcccagcatcgaatggtggaacctaccctggtatcttcatgtca
tctgagccagctcgtatggtccgtcctaccaagtacctcccacttgagcaggaagacttt
gtcggcccgctcgaacaaccttacatgtcgattgcctgtaccgaatctgaagtcgtttcc
ggagagtctacacacgtcgagtttgatcccaccaacattctatccattctggccaacatg
acgcccttttccgacttcaaccagtcgccgagaaacatgtaccagtgccagatgggtaag
caaaccatgggaacaccaggcacgtcccttcgatacagaacagacaacaagatgtaccgc
ctccagaccggccagacccctattgtgagatctcctctccacaacgcctacggcttcgac
aacttcccgaacggaaccaatgctgtagtagctgtcatctcgtacaccggttacgacatg
gacgacgccatgattctgaacaaatctgcacatgaacgaggattcggtcacggaacgatc
tacaaaaccaaaaagatcactctgaaggaagagaatcgtaccaagtccgccaagcatgta
acaaagcttttcggacatgcgcccaacacacttcagaagggttgggagcggacacagctt
gacgaggatggcctcccgtttgtcggtcgctgcatccaagagggcgacattctctgcgca
tggcacactgtctctgctgattacagcggcaacctggttaaccgagatggcatcacccat
tatgaaaagtacaaagagactgaagttgctttcattgaggaggtgcgagtcattggtagc
gagacaggcaacgagccaatgcagacaatctccatcaagctgagaatccctcgatctcct
gttatcggagacaagttctcatctcgtcacggacagaagggtgttgcttcgcagaagtgg
ccagccgtcgacatgcccttctcggagtcaggaatccagcctgatgtcatcattaaccct
cacgctttcccgtcgcgaatgaccattggtatgtttgtcgagtccttggccggcaaagcc
ggtgctcttcacggcttggcccaggactccacgcctttccgattcgacgaacagaacacg
gcaggcgactactttgggcaccagctcaagatggctggctacaactaccatggaaatgag
ccattgtactctggtatcactggtgaggaactggcggctgacatctacattggtgttgtc
tattatcaacgtcttcgtcacatggtgaacgacaagtaccaagtcagaacaacgggccct
gtggtgccaacaacgggccagcccattaagggaagaaagcgtggtggtggtatccgtgtg
ggagagatggaacgcgatgcactgctggcacacggtacagccttcctgctccaggaccgc
ctgatgaactgttccgattactcacgctcgtggatatgccgcaagtgtggttcgttcctc
tcgatgcagcccacggtgtctccctatgttgggaagaagaagacagtcagcagcgtgcgt
tgcagaaactgtgccacgcgcatcgatgagctagaagacgccgatctgagcaaggtggct
ggtgagatctgggaggatggacagggcaaccaatgggtcggtggtgaccaaaccaccttg
gtggccgtgcctggtgctttgaagtacctcgatgtcgagcttgcggccatgggtatcaag
ttgaagtacagggtcgaccccaaggacgctgctcgcaagggccctcttgtacagaccacc
tgggatgcgcttgaggcggctggcaagaaagcgcagcctgctctcgaagcggccgcatag
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